KEGG   Taeniopygia guttata (zebra finch): 100224169
Entry
100224169         CDS       T01082                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tgu03036]
    100224169 (KDM4A)
Enzymes [BR:tgu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100224169 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100224169 (KDM4A)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100224169 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 100224169
NCBI-ProteinID: XP_030134768
UniProt: A0A674H042
LinkDB
Position
8:complement(10481307..10507408)
AA seq 1052 aa
MASELESLNPGQRIMTFRPTMEEFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRQCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKSGKQCAEEMETEEMCKEEVDGDETKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSTQYEADMAEPRERPTSEFGQQGEERIKIPDRVDSARFEELKPVKPEVEEQEAAALDL
SISHASNSTSVLPASKQSAASSIQSSSPSYSSDSESSDLLAKRTLPGPAGVFTVHSYAKG
DASGSDSEQTSGKKASSSVNEQELTEVGKEHVSSMKESKKSKGRRQPLSKLPRHHPLLVK
DCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQPPYCAVCM
LFQAYQAECEGSSQNSGVTPAAADGKIRTKPLIPEMCFTATGCSTDLNLSTPYLEEDGTS
VLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQRANDDKW
VHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQCSHGRCP
TSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIVISKHKNG
RFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRWTDGQV
YGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRFTEIFEE
KEVSQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3159 nt   +upstreamnt  +downstreamnt
atggcttcggagctggagagcctcaaccccgggcagcgcatcatgaccttccgccccacc
atggaggagttccgcgacttcagccgctacatcgcctacgtggagtcgcagggcgcccac
cgcgccggcctggccaagatcgtgccgcctaaggagtggaagccgcggcagtgctacgat
gacatcgacgagctcgtcatccccgcgcccatccagcaggtggtgacggggcagtccggg
ctcttcacgcagtacaacatccagaagaaggccatgacggtccgcgagttccgtaggatc
gccaacagtgacaagtactgcacaccccggtacacagactttgaagaccttgaacgaaaa
tactggaagaacctcacgttcaatgcccccatctacggggcggatgttaatggcacgctc
tacgacaagcatgtagatgcgtggaatattggcagattgaacacgatcctagatattgtg
gagaatgaaagtggcataaccattgaaggagtgaatactccttacctatattttggcatg
tggaaaacttcctttgcttggcacactgaggacatggatctctacagtattaattacttg
cattttggggagcccaagtcatggtactccatccctccagagcatgggaaacggctggag
agacttgcaaaagggtttttcccaggaagtgcccaaagctgtgaagcatttctccgtcac
aagatgactctcatctctccatcaattctgaagaaatatggaattccatttgataaggtg
acacaggaggctggggagttcatgataacctttccttacagctatcatgctggctttaac
cacggctttaactgtgctgaatctaccaactttgctactcttcggtggattgagtatggg
aagcagtcggtgctgtgctcatgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccagaccgttacaagctttggaaagctgggaaggacgtgactgtc
attgaccatgctcttccaaccccagaggcagcagagttccttaaaggggatctcatgcaa
aaagtcaagagtgggaaacagtgtgctgaggagatggaaacagaagaaatgtgtaaagag
gaggtggatggggatgagacaaaaagcatccccaagcaccgcataggaacaaaaaggcac
agggtctgcctggaagtgcctcaggaggtgagtgagagtgaggccttccctaaggaggag
ctgagctccacacagtatgaagcggacatggcagagcctcgtgagaggcctacgagtgaa
tttgggcagcaaggtgaagaaaggatcaaaattccagatcgtgtggactcagccagattt
gaagaattgaaaccggtgaagcctgaggtggaagaacaagaagcagcggcgctggatctc
tccatttcacatgcttcaaattccacttcagtgttgccagcttcaaagcagagtgctgca
tccagtattcagtccagctcaccttcctattcttcagactcggaatcgtctgatctgctg
gcaaaacgaactctccctgggccagccggggtgttcacagtgcacagctatgcaaagggg
gatgccagcgggtccgacagtgagcagacttcagggaagaaagccagctccagtgtcaat
gagcaagaactgacagaggtgggaaaggagcacgtgagctccatgaaggagagtaagaag
tccaagggtcgtcgccagccgttgagcaaactcccccgtcatcacccactcctggtgaaa
gactgcatcagtgatgatgaggcatcagagcagctaactcctgaagaagaggctgaggag
acagaagcatgggccaagccactgagccagctgtggcagaatcggccgccaaactttgag
gctgaaaaagaatacaatcgcaccatggcccagcagcccccatactgtgctgtttgtatg
ctcttccaggcgtatcaggcagaatgtgaaggcagcagtcaaaactctggagtaactcca
gctgctgcagatgggaagatccgaacaaaacccctgattcctgaaatgtgctttactgca
actggctgcagcactgacctcaatctttcaactccctacctggaggaagatggaaccagt
gtactcatcacctgcaagaactgccatgtctgtgttcatgcaagttgttacggtgtatcc
cctgacaaggccactgaagactggatgtgctcccggtgtacagaaaacgcgttagaggag
gactgctgtttgtgttcattacgaggaggagcactgcagagagccaatgatgacaagtgg
gttcatgtgatgtgtgctgtggctgtactggaggcaaaatttgtgaacatcgcagagcgg
agtcctgtagatgttggcaaaatccccctgcaacgtttcagactgaaatgcatcttctgc
aagaaaaggagaaagagaattgcaggttgctgtgtacagtgttcacatggccggtgtccc
acatcctttcatgtcagctgtgcccaagcagcaggagttatgatgcagcctgatgactgg
ccatttgttgtcttcattacctgcttcaggcataagactccatctcaggctgagcgagct
aaggctgcactccaggatctgtcccctggacagatagtcatcagtaagcacaagaatggt
cgcttctatcaatgtgaagtggtcagccttgcaaaggagactttctacgaggtcaacttt
gatgatggctccttcagcgataacctgtacccagaggacattgtgagtcgagattgtctt
cagttaggtccccctgctgaaggagaagtcgtgcaggtgagatggacagacggacaagtt
tatggagccaagtttgtcgcgtcacacgccatccagatgtaccaggtggaatttgaagat
ggttcacagctgatggtgaaaagggatgatgtatatactcttgaagaggagcttcctaag
agagtgaagtcaaggctgtcaattgcttcagatatgcgcttcacagagatcttcgaagag
aaggaggtcagtcaagagaggaagagacaaagagtgatcaattcacgctaccgtgaagat
tatattgaacctgccttgtaccgggccatcatggagtaa

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