Taeniopygia guttata (zebra finch): 100224213
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Entry
100224213 CDS
T01082
Symbol
SMOC2
Name
(RefSeq) SPARC-related modular calcium-binding protein 2 isoform X1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100224213 (SMOC2)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100224213 (SMOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
Thyroglob_assoc
SPARC_Ca_bdg
Kazal_2
EF-hand_7
EF-hand_6
EF-hand_5
CFAI_KAZAL
Motif
Other DBs
NCBI-GeneID:
100224213
NCBI-ProteinID:
XP_030124204
Ensembl:
ENSTGUG00000009682
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All DBs
Position
3:complement(71548096..71687786)
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AA seq
472 aa
AA seq
DB search
MLQSLPFHSSSGKTPDIMNQLGSEYQKKAELSFQFWIIFFLRVDQDKDRECSLDCAGSPQ
KSLCASDGRTFLSRCEFQRAKCKDPQLEIAYRGNCKDVSRCVAERKYTQEQARKEFQQVF
IPECNDDGTYSQVQCHSYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVSEKLPQREGAGK
AVSLQIFSILNSDDASAPALETQPQGDEEDIASRYPTLWTEQVKSRQNKTNKSSASSCDQ
ELQSALEEAKQPQKDNVFIPECAQGGLYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRYEQ
PKCDNGARAHPTKTKDLYKGRQLQGCPGAKKNEFLTSVLDALSTDMVHAVSDPSLSSSRV
SEPDPNHTLEERVVHWYFKQLDKNSSGDIGKKEIKPFKRFLRKKSKPKKCVKKFVEYCDV
NNDKSLSVQELMGCLGVTKEEGKAETKKRHTVPRTNTESTSSSRQQVSKKQG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaatcactgccatttcacagcagcagtggaaaaaccccagatataatgaatcag
cttggatctgaataccaaaaaaaggcagaactttcttttcagttttggataatatttttt
ttgagagtggaccaagacaaagacagagaatgcagtctggattgtgcaggttcccctcag
aaatcactctgtgcgtctgatggaagaacttttctgtcccggtgtgagtttcaacgagca
aaatgcaaagaccctcagctggaaatagcctaccgaggcaactgcaaagatgtttccaga
tgtgtggctgagaggaagtacacccaagaacaggctcgcaaagaatttcaacaagtgttt
atcccagaatgcaatgatgacggcacatatagtcaggttcagtgccatagttacactgga
tactgctggtgtgtcactcccaatggccgtcctatcagtggtactgctgtggcccacaaa
actccccgctgcccaggttcagtgagtgagaagctgccacaacgagaaggtgcaggcaaa
gcagtctccttgcaaatcttttccattctgaattcagatgatgcctcagctcccgcgctg
gagactcagcctcaaggtgatgaagaagatatagcttctcgttatcctaccttatggact
gagcaagtaaagagtaggcagaacaaaaccaataaaagctcagcatcgtcatgtgatcaa
gaacttcagtcagccctggaggaagcaaagcagccccagaaagacaatgtgttcatacca
gagtgtgctcagggcggcctctacaaaccagtgcagtgccatccttccacaggctactgc
tggtgtgttctggtggatacgggacgtcccatccctggtacatcaaccaggtatgaacaa
cctaaatgtgataatggtgccagagctcacccaacaaaaacaaaggatttgtacaaaggg
cgccagcttcaaggttgtcctggggccaagaagaatgagttcctaacgagtgttttggat
gcattgtccacagatatggtgcacgcagtctctgatccatcgctgtcttccagccgtgtt
tctgagcctgatccaaatcatacactggaagagagagtcgtccattggtatttcaaacag
ctagataaaaattccagtggtgatatcggcaagaaggaaatcaagccatttaagagattc
ctaagaaaaaaatcaaagcccaaaaaatgtgtgaagaagtttgtggaatactgtgatgtt
aacaatgataagtccttgtcggttcaagaattaatgggctgcttgggagtaacaaaagaa
gaaggtaaagcagaaacaaagaaacgccatacagtccctagaaccaacactgaaagcact
tcatccagcaggcagcaagtttcgaagaagcaagggtga
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