Taeniopygia guttata (zebra finch): 100224238
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Entry
100224238 CDS
T01082
Symbol
PPP1CB
Name
(RefSeq) serine/threonine-protein phosphatase PP1-beta catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03015
mRNA surveillance pathway
tgu04114
Oocyte meiosis
tgu04218
Cellular senescence
tgu04261
Adrenergic signaling in cardiomyocytes
tgu04270
Vascular smooth muscle contraction
tgu04510
Focal adhesion
tgu04810
Regulation of actin cytoskeleton
tgu04910
Insulin signaling pathway
tgu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100224238 (PPP1CB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgu01009
]
100224238 (PPP1CB)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100224238 (PPP1CB)
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100224238 (PPP1CB)
03041 Spliceosome [BR:
tgu03041
]
100224238 (PPP1CB)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100224238 (PPP1CB)
Protein phosphatases and associated proteins [BR:
tgu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
100224238 (PPP1CB)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100224238 (PPP1CB)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100224238 (PPP1CB)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100224238 (PPP1CB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
100224238
NCBI-ProteinID:
XP_030125048
LinkDB
All DBs
Position
3:complement(104219575..104248271)
Genome browser
AA seq
327 aa
AA seq
DB search
MADGELNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKI
CGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQ
SMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDL
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK
KAKYQYGGLNSGRPVTPPRTANPPKKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggagctgaacgtggacagcctcatcacccggctgctggaagtacgagga
tgtcgtcctgggaagattgttcagatgaccgaagcagaagttcggggcttgtgcataaaa
tcacgggaaatatttcttagccagcctattcttctggaactagaggcacctctgaaaatt
tgtggtgatatccatggccagtatacagacttgcttcgattatttgaatatggaggattc
ccaccagaagctaattatcttttccttggagattatgtagacagaggcaaacagtctctg
gaaacaatttgcctattactggcatataaaatcaagtatccggaaaacttctttctccta
agaggaaatcatgagtgtgctagcatcaatcgcatctatggattttatgatgaatgcaag
cggagatttaacattaagctgtggaaaaccttcacagactgttttaactgcctgcctatt
gcagccattgtggatgagaagatcttctgttgtcatggaggactgtctccagatctccag
tcgatggagcagatccggagaattatgagacctacagatgttcctgacacaggtttgctc
tgtgacctgctgtggtctgacccagacaaagatgtgcaaggttggggtgaaaatgatcgt
ggggtctctttcacttttggtgctgatgtggtcagtaaatttctgaatcgtcatgatctg
gatttgatctgtcgagctcatcaggtggttgaagatggatacgagttctttgctaaacgg
cagttggtcaccctattctcagctccaaactattgtggagagtttgacaatgcagggggc
atgatgagtgtggatgaaactctgatgtgttccttccagatattgaaaccatctgaaaag
aaagccaagtaccagtatggtggactgaattctgggcgtccagtcactccacctcgcaca
gctaacccaccgaagaagaggtga
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