Taeniopygia guttata (zebra finch): 100224399
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Entry
100224399 CDS
T01082
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100224399 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100224399 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100224399 (VPS36)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100224399 (VPS36)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100224399 (VPS36)
Exosomal proteins of colorectal cancer cells
100224399 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
GRAM
BBL5_2nd
DUF1351
BBL5
DUF5847
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
100224399
NCBI-ProteinID:
XP_012425288
Ensembl:
ENSTGUG00000012036
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All DBs
Position
1:60759183..60779014
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWESMPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQTPLEEQGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLEPLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTRS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtggtccag
cagcgcggcgtgcgcctcagcgacggggaggagaaggtgaaatttgatagtggagtttta
ctgctgagcacacacagactgatctggagggaccagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtatttattgaagagcaagcagctgggataggaaagagtgct
aaaatagtggttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcatacatcaagctttctttcaaagagcatgggcagattgagttctacaga
cgattatcagaagaaatcacacaaaggagatgggagagcatgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggccgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagcaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagctaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaggttcaagtcctac
ctactcagtatgggtatagctaatccagttacgagggaaacatatggatctggtacacag
taccacatgcaactggcaaagcaactggctggaatcctgcagacacccttagaggagcaa
ggggggatcatgtctctgactgaagtgtactgcctggtgaatcgtgctcgagggctagag
ttgctgtcaccagaagatttagtaaatgcttgtaaaatgctagaaccactgaaattgcca
ctaaggcttcggatatttgatagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacgaagctaa
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