Taeniopygia guttata (zebra finch): 100224399
Help
Entry
100224399 CDS
T01082
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100224399 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100224399 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100224399 (VPS36)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100224399 (VPS36)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100224399 (VPS36)
Exosomal proteins of colorectal cancer cells
100224399 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
DUF1351
BBL5
Motif
Other DBs
NCBI-GeneID:
100224399
NCBI-ProteinID:
XP_012425288
Ensembl:
ENSTGUG00000012036
LinkDB
All DBs
Position
1:60759183..60779014
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWESMPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQTPLEEQGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLEPLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTRS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtggtccag
cagcgcggcgtgcgcctcagcgacggggaggagaaggtgaaatttgatagtggagtttta
ctgctgagcacacacagactgatctggagggaccagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtatttattgaagagcaagcagctgggataggaaagagtgct
aaaatagtggttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcatacatcaagctttctttcaaagagcatgggcagattgagttctacaga
cgattatcagaagaaatcacacaaaggagatgggagagcatgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggccgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagcaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagctaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaggttcaagtcctac
ctactcagtatgggtatagctaatccagttacgagggaaacatatggatctggtacacag
taccacatgcaactggcaaagcaactggctggaatcctgcagacacccttagaggagcaa
ggggggatcatgtctctgactgaagtgtactgcctggtgaatcgtgctcgagggctagag
ttgctgtcaccagaagatttagtaaatgcttgtaaaatgctagaaccactgaaattgcca
ctaaggcttcggatatttgatagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacgaagctaa
DBGET
integrated database retrieval system
