Taeniopygia guttata (zebra finch): 100224472
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Entry
100224472 CDS
T01082
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100224472 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100224472 (SPAST)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100224472 (SPAST)
Membrane trafficking [BR:
tgu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100224472 (SPAST)
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100224472 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
Mg_chelatase
AAA_16
AbLIM_anchor
AAA_14
MIT
IstB_IS21
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
100224472
NCBI-ProteinID:
XP_002192150
Ensembl:
ENSTGUG00000008494
LinkDB
All DBs
Position
3:75744528..75783163
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AA seq
612 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSAPPTAGASPSSPPGPAPPVPPAGAAAAASPHKRNLYYFSYPL
FAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGDAPEPGGAPETVRACHKRA
FECISMALRIDEDETAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMT
NLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKTGSTGLSGHHRTPSYSGVSSSVSRPAPNPTSSAHKAAPKNSRTNKPSTP
TTAPRKKKDPKIFRNVDSNLANLILNEVVDSGPAVKFDDIAGQELAKQALQEIVILPSLR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMG
ATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAY
IRWNKDFGDTTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggtggccgagggaagaagaagggctcagccggctccagttccgcgcct
ccgaccgccggcgcctctccctcctcgccgcccgggccggcgccccccgtgccgccggcg
ggggcggcggcggcggcgtccccgcacaagcggaacctgtactacttctcgtacccgctc
ttcgccgccttcgccctgctccgcttcgtcgccttccagctcgggctgctcttcgcctgg
ctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggcc
ggcgacgcgcccgagcccggcggggcgcccgagactgtgcgggcgtgccacaagcgggcc
ttcgagtgcatctctatggctctgcgcatcgacgaggacgagacagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgatcagtgtgaacgggctcgacgtctccaatctaaaatgatgaca
aatttggcaatggccaaggatcggttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggatcccttaacacacacgagt
aattcccttcctcgttcaaagactgttgcaaaaactggatccacaggcctttcaggtcac
cacagaactcccagctacagtggggtatcatcatctgtgtctagaccagcgcctaatcct
acatcttcagctcacaaggctgctcctaaaaacagtagaacaaataagccttctactcct
accactgctcctcgaaaaaagaaagacccaaagatatttagaaatgtggacagcaatctt
gctaatcttatcctaaatgaagttgttgatagtgggccagctgtcaaatttgatgatatc
gcagggcaggaactggctaaacaagctttgcaagaaattgttatacttccttctcttaga
cctgagttatttacaggtctgagagctcctgcacgtggtttattgctgtttggcccacca
ggaaatgggaagacaatgttggccaaagcagttgctgcagaatcaaatgctactttcttt
aacatcagtgcagcaagtctgacttcaaaatatgtgggtgaaggggagaaactggtgcgt
gctctatttgcagtagctagagaacttcaaccttctataatttttattgatgaagttgat
agccttttgtgtgaaagacgagaaggtgaacatgatgctagcaggcgtctaaaaacagag
tttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatggga
gcaacaaacaggcctcaggagcttgatgatgctgttctcagacggttcaccaaacgggtg
tatgtgtctttaccaaacgaggaaacaagattgattttgctcaaaaatcttctaagcaag
caaggaagtccattaacccaaaaagagttggctcaactagctagaatgacagatggatac
tctggaagtgacctaactgcattagcgaaggatgcagcacttggccccattcgagaatta
aaaccagaacaggtgaagaacatgtctgccagtgagatgagaaatatcaagctgtcagat
ttcacagaatctttgaagaagatcaagcgcagtttgagcccacagaccctggaagcgtat
attcgctggaacaaggactttggagataccacagtgtga
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