KEGG   Taeniopygia guttata (zebra finch): 100224586
Entry
100224586         CDS       T01082                                 
Symbol
TOB1
Name
(RefSeq) protein Tob1
  KO
K14443  protein Tob/BTG
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100224586 (TOB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100224586 (TOB1)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100224586 (TOB1)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     100224586 (TOB1)
SSDB
Motif
Pfam: BTG PAM2
Other DBs
NCBI-GeneID: 100224586
NCBI-ProteinID: XP_002198161
Ensembl: ENSTGUG00000009238
UniProt: H0ZG06
LinkDB
Position
18:complement(9626190..9630573)
AA seq 323 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNENG
CELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTAT
FAATKFGSTKMKNSGRGNKVARTSPTNLGLNVNDLLKQKSLSSSMHSLYGLGLGSQQQQQ
QKTSALSPNAKEFIFPNMQGQGSTSSIFPGDSPLNLSPLQYSNAFDMFAAYGGLNEKSFV
DGLNFSLNNMQYSNQQFQPVMAN
NT seq 972 nt   +upstreamnt  +downstreamnt
atgcagcttgaaatccaagtagcactcaattttattatttcatatttgtacaataagctt
cccagacgacgtgtcaacatttttggtgaagagcttgaaagacttctgaaaaagaagtat
gaagggcactggtatccagaaaagccatacaaaggatcagggtttagatgtattcatata
ggggagaaagtggacccagtcatagaacaagcatccaaagagagcggtttggacattgat
gatgttcgtggcaacttgcctcaggatctcagtgtttggattgacccgtttgaggtttca
taccaaatcggtgaaaagggaccagtgaaagtgctttacgtggatgataacgaaaatgga
tgtgagttggataaggaaatcaagaacagctttaaccccgaggcccaggtgttcatgcct
attagtgacccagcatcttcagtgtctagttctccttctcctcccttcggtcactcagct
gctgtgagcccgaccttcatgccccgctccactcagcctttaaccttcaccactgccaca
tttgctgccaccaagtttggctcaaccaaaatgaagaacagcggccgtggcaacaaggtc
gcccgcacctctcccaccaaccttggcttgaatgtcaatgacctgctgaagcagaaatcc
ctctcctcctccatgcactctctctacgggcttggcctaggcagtcagcagcagcagcag
cagaagacttctgctctctctcctaacgcaaaggagttcattttccccaacatgcagggt
caaggtagtaccagtagcatctttcctggtgacagcccccttaacctcagtcctctccag
tacagtaatgcctttgatatgtttgcagcctatggaggtctaaatgagaagtcttttgtg
gatggcttgaattttagtttaaacaacatgcagtattctaaccagcaattccagccagtt
atggctaactga

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