Taeniopygia guttata (zebra finch): 100224668
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Entry
100224668 CDS
T01082
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100224668 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
100224668 (NFASC)
Cell adhesion molecules [BR:
tgu04515
]
Immunoglobulin superfamily
L1 family
100224668 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
100224668
NCBI-ProteinID:
XP_030111715
LinkDB
All DBs
Position
26:2900754..2981265
Genome browser
AA seq
1380 aa
AA seq
DB search
MIPRRAQVTCAGIAFALCLQHLVSAIEVPLDSNIQNELPQPPTITKQSIKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSS
MEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSH
NETSLGNSPAMYRARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PENLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIESSPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILGPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGSRMKKEEDGLTIYGV
TEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSVPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVRGARHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVS
FPGDRNRGTVSRLFPYSNYKLEMVVTNGRGDGPRSEMKEFPTPEGVPSSPRYLRIRQPNL
EIINLEWDHPEHPNGIITGYTLRYQPFNGSRTGRTVVENLSPNQTRFTLQRSDPISRYRF
VLRARTQVGEGEALVEESPALLDEATPSPEATGPPPTTVEETSPETSPETSPTISPTISP
TISATISPTISPTTTPTTTDTTTTTTTTTTTTTTTSTAASTAASTSAAAERAPAATTRHE
LAANGSSIWDIRAMANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVKAQGPSSVQL
ADLTPGMMYKLWVFPIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIALLVLI
LLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYRSLESDEDNKPLPNSQTSLDG
TIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggagagcccaggtcacctgcgccggaattgccttcgccctctgcctccag
caccttgtcagcgccatcgaggtccccctggactcaaatatccagaatgaattgccgcag
ccccccacgatcaccaagcaatccatcaaggattacatcgtggatcccagggataacatc
ttcatagaatgtgaagccaaaggcaaccccgttcccaccttttcctggacgcggaacggg
aagttcttcaacgtggccaaggatcccaaggtgtccatgaggaggagatcggggactttg
gtcatcgacttccacagcgggggccggcccgatgactacgagggcgagtaccagtgcttc
gccaggaacgactacggcacggccctttccagcaaaatccacctccaggtttccaagtct
ccgctgtggcccaaggaaaaggtggatgtgatcgaggtggacgagggggccccgctgagc
ctgcagtgcaatcccccgcctggcctccccgagcctgtcatcttctggatgagcagctcc
atggagccgatcccgcaggacaagcgcgtgtcccagggccacaacggggacctttacttc
tccaacgtgctggcgcaggacgcgctgaccgactacagctgcaacgcccgcttccacttc
acccacaccatccagcagaagaacccctacaccctcaaggtcaaaaccaagaagtcccat
aacgaaacgtctttaggaaattcccccgccatgtaccgcgcccgagggatcacggaaacc
actcccagcttcatgtatccctacggaacttccagcagccagatggtgctccgaggggtg
gatctcctgctggaatgcatcgcctctggagtaccagcgccggacatcatgtggtacaag
aaaggtggagagctgccggtgggcaaaaccaagctggagaacttcaacaaggccctgcgc
atctccaacgtgtccgaggaggactccggggaatatttctgcctggcctccaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccctactggctggatgag
ccggagaacctgatcctggcccccggcgaggacggcaggctcgtgtgccgggccaacggc
aaccccaaaccgtccatccagtggctggtgaacggagagcccatcgaatcgtctccccca
aacccgagccgggaggtggccggggacaccatcgtgttccgggacacgcagatcggcagc
agcgccgtgtaccagtgcaacgcgtccaacgagcatggctacctgctggccaacgccttc
gtcagcgtgctggatgttcccccccggatcctgggcccccggaaccagctgatcagggtg
atccagaacaacaggacgcgcctggattgtccctttttcgggtcccccatccccaccctg
cgctggtttaagaacggccaggggaacacgctggatggaggcaactacaaagcccacgag
aacgggagcttggagatgttcatggctcggaaggaggaccagggaatctacacctgtgtg
gccaccaacatcctggggaaagctgaggcccaggtccgcctggaggtcaaagaccccacc
aggatcgtgaggggccctgaggaccaggtggtcaagaggggcaccatgccccggctccac
tgccgcgtcaagcacgaccccacgctgcggctcatggtcacctggctcaaggacgatgcc
ccactgtacctgggcagcaggatgaagaaggaagaggatggtctgacgatctatggtgtg
actgagaaggaccagggcgattacacgtgcgtggccagcacggagctggacaaggacttg
gccaaggcctatctcaccgtgctggccatccccgctaatcggttgagagatttacccaaa
gaacgacctgaccggccccgggacttggagctgacggatctggccgagaggagcgtgcgg
ctgacgtggatccctggcgatgacaacaacagccccatcacagactacattgtccagttt
gaggaggaccgtttccagccaggaatgtggcacaaccactccaggtatcccgggagcgtc
aactcggccgtgctgagcctgtcgccgtacgtgaattaccaattccgggtgatcgccgtc
aacgacgtgggcagcagcgtgcccagcctgccctccgagcgctaccagaccaacggggca
cgtcctgaaataaatccaacgggcgttcaaggggcagggacccaaaaaaacaacatggag
ataacatggacccctctgaacgcaactcaggcttatgggcccaacctcaggtacatcgtg
aggtggcggcggcgggacccccgcgggagctggtacaacgagaccgtgcggggcgcgcgg
cacgtggtgtggaacacgcccatctacgtcccctacgagatcaaggtgcaggccgagaac
gacttcggcagagccccggagcccgacacctacatcggatactccggggaggattatccc
aaggctgcgcccacagatgtcaggatcagagtcttaaacagcactgccatagctctgacc
tggacccgggtgcacctggacaccatccagggacagctcaaggagtaccgagcctatttc
tggagagacagcagcttgctgaagaacctgtgggtctccaaaaaacggcagtttgtgagt
tttcctggagaccgcaaccggggcaccgtgtcccggctgttcccttacagcaactacaag
ctggagatggtggtcaccaacggccgaggggacgggccccgcagcgaaatgaaggaattc
cccacccctgaaggagtgcccagctcccccaggtacctgcggatccgacagcccaacctg
gaaatcatcaacctggagtgggatcaccccgagcatcccaacgggatcatcacgggatac
accctccgataccaaccctttaacgggtcgcggacgggccggacagtggtggagaacctg
tcccccaaccagacgaggttcaccctgcagaggtcagaccccatctcccgctatcgcttc
gtgctccgcgcccgcacccaggtgggagagggagaggccctggtggaggagtcgccagcg
ctgctggacgaagccacgccaagcccagaggcaactgggccgcctccaaccacagtggag
gaaaccagtcctgaaaccagtcctgaaaccagtcctacaatcagccctacaatcagtcct
acaatcagtgctacaatcagtcctacaatcagccctacaaccaccccaaccaccaccgac
accacaaccacaacaaccaccaccacaaccaccacaaccaccaccagcaccgccgccagc
accgccgccagcaccagcgccgctgccgagagggctccggcagccaccaccaggcacgag
ttggccgccaatggatcgtccatatgggacatcagagccatggcaaacagtaactgggca
aacatcacctggagccacaatttctcggcaggaactgactttgtggttaagtatatcacc
agtaacaagacagagaaatcaatccccgttaaggctcagggcccgtcctcggtgcagctg
gcggatctgacgccggggatgatgtacaagctgtgggtgttccccatatggtcccacccc
agcgagcactcgtacattacctttaccaccagctcagcctacaccaagaaccaggtggac
atcgccacgcagggctggttcatcggcctcatgtgcgccatcgccctcctggtgctcatc
ctcctcatcgtctgcttcatcaagaggagccgcggcgggaagtacccagtgcgggacaac
aaggacgagcacctcaatcccgaggacaagaacgtggaggacggatccttcgactacagg
tctcttgaaagcgatgaagacaacaaacctcttcccaacagtcagacctcgctggacggg
acgataaagcagcaggagagcgacgacagcttggtggactacggagaagggggcgagggc
cagttcaacgaggacggctccttcatcggccagtacacggtcaagaaggacaaagaggag
accgagggcaacgagagctccgaggccacgtcccccgtcaatgccatttattccttggca
tag
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