Taeniopygia guttata (zebra finch): 100224680
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Entry
100224680 CDS
T01082
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100224680 (NOTCH2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
100224680
NCBI-ProteinID:
XP_030135623
LinkDB
All DBs
Position
8:27422346..27505779
Genome browser
AA seq
2431 aa
AA seq
DB search
MARGAGPALAALLALVLAVLRRAEPAAALQCMDDSKPCVNEGKCIPYQNGTGYCKCREGF
LGDYCQYRNPCESNTCKNGGTCEAASLIGKPTCKCAPGFTGEECQYSESHLCYVSQPCLN
GGTCHPHGQDTYECVCVPGFTGKECQWIDACTSQPCANGSTCTVSGNKFSCTCPAGYTGQ
RCETDVNECATPGLCQHGGTCVNLPGSYRCQCRLGYTGHRCESPYVPCSPSPCMNGGTCH
QTSDFTFECNCLPGFEGSVCGHNVDDCPNHKCLNGGVCVDGVNTYNCRCPPQWTGQFCTE
DVDECQLQPNACQNGGTCTNHNGGYACVCVNGWSGDDCSKNIDDCFTASCANGSTCIDRV
ASFSCICPEGKAGLLCHLDDACVSNPCQKGALCDTNPVNGNYICTCPQGHKGADCTEDVD
ECAMANSNPCEHAGKCVNTEGSFHCECLKGYTGPRCEMDINECHSNPCQNDATCLDKIGG
FTCLCMPGFKGVHCEQDIDECLSNPCVNNGVCLDKVNRFLCVCPPGFSGAVCQIDIDDCS
STPCLNGAKCIDHPNGYECQCATGFTGLLCEENINNCDPDPCHHGECQDGIDSYTCICNP
GYMGAICSEQIDECHSNPCLHQGRCIDLVNGYQCNCLLGTSGVNCENNFDDCASNPCIHG
DCIDGINRYNCACKPGFTGPRCNADIDECTSSPCHNGGTCINEVNGFRCVCPEGFHHPHC
QSQADGCLSNPCVHGNCTHIATGYKCVCDPGWIGDYCSTEGNECKSNPCQNGGTCEDLLN
GYRCACRKGFKGVNCQVVVSPCSPNPCENSGICQESPDSEGYTCQCAPGWEGERCTVDID
ECLSKPCKNHALCHNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNGASCVDGIDSFSC
ICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCPPGFQGTNCESNIDECTDSS
CFNGGTCVDGINSFTCQCPLGFTGPFCLTEINECDSHPCLNRGTCVDSLGTYRCICPLGY
TGKNCKSLVDLCSKSPCKNRGTCVQTLAQTRCVCPPGWTGAYCDVPNVSCQVAASQRGVP
VDQLCQHSGHCLNVGNTHHCQCQVGYTGSYCEVQLDECDSSPCQNGATCRDHLGGYQCEC
VAGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFKCSCPPGTRGRFCEENVDDCASESGA
PRCFNGGQCIDQIGGYSCLCPQGFAGERCEGDINECLSNPCNPRGSLDCVQLTNDYRCIC
RSAFTGRHCESVIDVCPRRPCQNGGTCAVASNMPDGFICQCPPGYSGAKCEFSSHSTCGQ
VKCKKGEQCIQTSSGPRCYCPKLSVGEECQTHPGCASAPCQNGGSCHPHSQPPYYYCQCP
VHTQGSHCEQPVTFSPEPRRCLHSQCAEKARDGYCDEDCNTHACQWDGGDCSLTVEDPWA
NCSSSLPCWMLFNGQCDEFCNTPECLFDNFECQQNSRTCKYDKYCADHYADGRCDQGCNS
EECGWDGLDCAGDKAEKLAEGTLIIVVLMPPDELLGDVRSFLRTLGTLLHTNLRIKLDSQ
GNPMVFPYYGEKSAARSRRSLVVVRKHRELEQEVIGTKVFLEIDNRQCAEDSEQCFHNTE
AAAALLAAQAIKGMLPYPFVSVQSEPLLPPKTQLLYLLAVAALIILLILLLGVMMAKRKR
KHGSLWLPEGFILRRDPSNHKRREPVGEDAVGLKNLSVQIPEGNLADPGTTEHWAGDGGP
QPKRAKAEDQALLPEGDEQIDQRQWTQQHLEAADVCGSTSLALTPPQADQEVDVLDVNVR
GPDGCTPLMLASLRAGGSDISEDDEDGEDSSANIITDLIYQGANLQAQTDRTGEMALHLA
ARYSRADAAKRLLDAGADANARDNMGRTPLHAAVAADAQGVFQILIRNRVTDLDARMNDG
TTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLVLLKNGANRD
MQDNKEETPLFLAAREGSFEAAKILLDHFANRDITDHMDRLPRDVAQDRMHHDIVQLLNE
YNVAHSPAGHPGAMLNSALSPVICGPNRSFLNLKHASLSKKSRKPNAKGMPTSLTKDAKR
RRKKSLSEGKGQFSESSVTLSPVDSLESPHAFVSEPTSSPVMPSPGVLHSSPSSLLTAPS
VQAAHTMSFSNLHEMQPLGRGSSTVLPSVSQLLSQHRTTPPNSGLGRLRPGNVSTEWMNR
MEVNESQYNEMFGMVPQVMHSHPSVSQQSGLVQADAKHLGVSRESLPPIMTFQLVPKGSI
SQQALPQQAQSNCAQNMAGPLSSMYQIPDLAQLPSASFSMAAIPQQDGQVAQTVLPAYHQ
FQSSMGKYPTPPSQHSCYSSATERTPSHNRHLQGEHPYLTPSPESPDQWSSSSPHSASDW
SDVATSPSNNQRGPAAAHMTEQQRNNMQVYA
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcggagcggggcccgcgctcgccgcgctcctcgccctggtgctggccgtgctc
cgccgcgccgagcccgccgccgctctgcagtgtatggatgactccaagccgtgtgttaat
gagggaaagtgcattccatatcaaaatggtacaggatattgcaagtgtcgagaaggcttt
cttggagactactgtcagtacagaaacccctgtgagagcaatacctgtaagaacggggga
acctgtgaagctgcatccctgataggaaaaccaacctgcaagtgtgctccaggattcaca
ggggaggaatgtcagtactcagaatctcacctctgctacgtgtcccagccctgccttaac
ggaggcacttgtcacccccatggccaggatacgtacgagtgcgtctgtgtcccaggtttc
acaggaaaggaatgccagtggattgatgcctgcacatctcaaccttgtgccaatggaagt
acatgcactgtgtctggaaataagttctcctgcacctgcccagcgggctacactggccag
aggtgcgagacagacgtgaacgaatgtgccacgccaggcctgtgccagcacggtggcacc
tgtgtcaacctgcccggctcctaccgctgccagtgcaggctgggctacacgggccaccgc
tgcgagagcccctacgtgccctgctccccgtccccctgcatgaacgggggcacctgccac
caaaccagtgacttcaccttcgagtgcaactgcctgcccggtttcgaggggagcgtctgc
ggacacaacgtggacgactgccccaaccacaagtgcctgaacgggggtgtttgcgtggac
ggggtgaacacctacaactgccgctgcccgccccagtggacaggccaattttgcaccgag
gatgtggatgaatgccagctccagcccaatgcctgccagaacgggggcacctgcaccaac
cacaacgggggctacgcctgcgtctgcgtcaacggctggagcggggacgactgcagcaag
aacatcgatgactgcttcactgcctcctgtgccaatggctccacctgcatcgacagggtg
gcttccttctcctgcatctgtccagagggaaaggcaggtcttctgtgccacttggatgat
gcctgtgttagcaatccgtgccagaaaggtgctctttgtgacaccaaccctgtgaatgga
aactacatctgcacctgtccccaaggccataagggagcagactgcactgaggatgtggat
gaatgtgcaatggcaaacagcaatccgtgtgagcacgctgggaaatgcgtcaacaccgag
ggctctttccactgtgagtgtctgaagggctacacagggcctcgctgtgagatggacatc
aatgagtgccactccaacccgtgccagaacgatgccacctgcctggataaaattggagga
ttcacgtgtctctgtatgccaggttttaaaggagttcactgtgaacaagatattgatgaa
tgcctaagtaatccctgtgtgaacaatggagtgtgtcttgataaagtcaaccgcttcctc
tgtgtctgtcctcctggattcagtggggccgtgtgccagattgacatagacgactgttcc
agcacgccgtgtctcaatggagccaaatgcattgaccaccccaatggctacgagtgccag
tgtgccacaggttttactggccttctgtgtgaggagaacatcaacaactgtgatcctgat
ccctgccaccacggagaatgccaggatggcattgattcatacacgtgcatctgcaaccct
ggttacatgggtgccatatgcagcgagcagatcgacgagtgccacagcaacccttgcctg
catcaagggcgctgcatcgacctggtcaatggctaccagtgcaactgcttgctgggcacc
tcaggagtaaactgtgagaataactttgacgactgtgccagtaacccgtgcattcatggg
gactgtattgatggcattaatcgctacaactgcgcctgcaaacctggatttacaggcccc
cgctgtaacgcggacatcgacgagtgcacgtccagcccgtgccacaacggcggcacgtgt
atcaacgaggtgaacggctttcggtgtgtgtgccccgagggtttccaccacccccactgc
cagtcccaggctgatggctgcctcagcaacccctgtgtgcatggcaactgcacacacatt
gccactgggtacaagtgtgtctgcgacccaggctggataggagattactgttcaacagaa
gggaatgaatgtaaatcaaacccatgccagaatggaggaacttgtgaggatctgttgaat
ggatacagatgtgcctgtagaaagggattcaaaggtgtgaactgccaggtggtggtttct
ccttgttcccctaacccttgtgagaattcgggaatctgccaagaatctcctgactctgaa
ggctacacctgccaatgtgcccctggctgggaaggggaaagatgcacagtggatattgat
gagtgtctctccaagccctgcaagaaccatgccctgtgccacaacatccagggcagttac
ctgtgcgagtgtcggcctggcttcaccggaggggactgtgacagcaacattgatgactgc
ctgtcaaatccctgccagaacggagcctcgtgcgtggatgggatcgactccttctcgtgc
atctgcctgcccgggtttcacggggataaatgtcagacagacaccaacgagtgtctgagt
gagccctgcaggaacgggggcacctgcacccactacgtcaacagctacacctgcaagtgc
ccgccgggcttccagggcaccaactgcgagagcaacatcgacgagtgcaccgacagctcc
tgtttcaatggaggcacttgtgtggatggaatcaattccttcacctgccagtgccccctg
ggcttcacgggacccttctgcctgacagaaatcaacgagtgtgactcccatccctgcctc
aacaggggcacctgcgtggacagcctgggcacatacaggtgtatatgtcccttgggctac
actggcaagaactgcaagtctctcgtggatctgtgcagcaagtctccctgtaagaacaga
ggcacgtgtgtgcagactctggcccagactcggtgtgtgtgcccgcccggctggaccggt
gcctactgcgacgtgcccaacgtctcctgccaggtggcagcttcacagagaggagttcct
gtggaccagctgtgccagcactcgggtcactgcctcaacgtgggcaacacccaccactgc
cagtgccaggtgggttacacgggcagctactgcgaggtgcagctggatgagtgcgactcc
agcccctgccagaacggagccacctgccgggaccacctgggcggataccagtgcgagtgt
gtggctggataccagggtgtcaactgcgagtacgaggtggatgagtgccagttccagccc
tgccagaacggagggacctgcatcgacctggtcaatcacttcaagtgctcctgcccacca
ggaactcggggccgcttctgtgaggagaacgtggatgactgcgcctcggagtcgggagct
ccccgctgcttcaacgggggccagtgcattgaccagatcgggggctacagctgcctctgt
ccccagggcttcgcaggagagcgctgcgagggggacatcaacgagtgcctctccaacccc
tgcaaccctcgagggagcctggactgtgtccagttgacaaatgattacaggtgcatctgc
cgtagtgctttcactggccggcactgtgagagtgtcatcgacgtgtgtccccggaggccg
tgccagaacggcggcacctgcgctgtggccagcaacatgcccgatggcttcatctgccag
tgccccccgggttattctggagcaaaatgtgaattcagcagccacagcacttgtggacaa
gtgaaatgcaagaagggggagcagtgcatccaaacatcttctggtccacggtgctattgc
cccaagctgtctgtgggagaggaatgccagacacacccaggctgtgccagtgccccctgc
cagaatgggggcagctgccaccctcattctcagcctccttactattactgccagtgccct
gttcacacccagggcagccactgtgagcagcctgtaactttcagcccggagcctcgcaga
tgcctgcattcccagtgtgcagaaaaagccagggatggctattgtgatgaagactgtaac
acccatgcgtgccagtgggatggaggcgactgctccctgacagtggaggatccttgggcc
aactgctcctcctccctgccctgctggatgcttttcaatggacagtgtgatgagttctgc
aacacacccgagtgcctgtttgacaactttgagtgtcagcaaaatagcaggacatgcaag
tatgacaagtactgtgcagatcactatgcggacgggcgctgcgaccagggctgcaacagc
gaggagtgcggctgggacggcctggactgcgccggcgacaaggccgagaagctggcagag
ggcaccctgatcatcgtggtcctcatgccccccgacgagctgctgggggacgtccgcagc
ttcctgcgcaccctgggaacgctcctgcacaccaatctgaggattaaactggactcccag
ggaaaccccatggtgttcccgtactacggggagaaatcggcagcacggagccgtcggtcg
ctcgtggtggttcgcaagcacagagagctggagcaagaggtcattggcaccaaggtgttc
ctggagatcgacaaccgccagtgtgcagaggactcggagcaatgctttcacaacacagaa
gctgctgcagctctcttagctgctcaggccatcaagggcatgttgccctatccttttgtg
tctgtccaaagtgagcccttgttaccaccaaagacccagctgctttacctgcttgctgtg
gcagctttgatcatcctgctgatccttctcctgggtgtgatgatggccaagcgcaagcgc
aagcacggctctctgtggctcccagagggcttcatcctgcgcagggatcccagtaaccac
aaacgcagagagcccgttggggaggatgctgttggactcaaaaatctgtcagtccagata
ccagagggtaacctggccgaccctgggacgactgagcactgggcaggtgatggtggacct
cagccaaagagagctaaggctgaggaccaggccttgctgccagaaggggacgagcagatt
gaccagcgccagtggacccagcagcacctggaggcagcagatgtctgtggcagcacctcc
ctggccctcacacccccccaggcagatcaagaagtggatgttctggatgtcaacgtcaga
gggccagatggctgcactccgctgatgttggcatctctgcgtgcgggcggctccgacatc
agcgaggatgacgaagatggggaagactcctcagcaaacatcatcacggatctgatctac
cagggggccaacctgcaggcgcagacagaccgcactggggagatggctctgcacctggca
gcccgatactccagagccgacgctgccaagcggctcctggatgccggggcggatgccaat
gctcgggacaacatgggacggacccctctgcacgcagccgtggctgccgacgcccagggg
gtgttccagatcctgatccgtaacagagtgacagacttggatgctcggatgaatgatggg
acgaccccgttaattctggctgcacgtctggctgtggaagggatggtggccgagctcatt
aattgccaggctgatgtgaacgccgtggatgaccacggtaaatctgctcttcactgggct
gctgctgttaacaatgtggaagcaacactagtactgctgaaaaatggagccaacagagac
atgcaggataacaaggaggagactccactcttcctcgctgctcgggaaggcagctttgaa
gcagcaaaaatcttgctggatcattttgccaaccgagacatcacagaccacatggaccgg
ctgccccgggacgtggcccaggaccggatgcaccacgacatagtgcagctcctcaatgag
tacaatgtggcccacagccctgccgggcaccccggggccatgctgaactctgccctctcc
ccagtcatctgcggccccaacaggtccttcctcaacctgaaacacgcgtcactaagcaag
aagtcacgaaaaccgaatgccaaaggcatgcccaccagcctcaccaaagatgcaaagagg
agaaggaagaagtccctcagtgagggcaaagggcagttttcagagagctccgtgaccctg
tcaccggtggattccctggagtctccccatgcttttgtatctgaaccaacctcttctcct
gtgatgccgtcaccgggggtgctgcactcttcgcccagctcgctgctgacggctccgtcg
gtgcaggctgcgcacaccatgtccttctccaacctccacgagatgcagcccctggggcgt
gggtccagcacggtgctcccatccgtcagccagctgctctcacagcacagaaccacccct
cccaacagcgggctcggcaggctgcggccaggcaacgtctccaccgagtggatgaaccgc
atggaggtgaatgagtcccagtacaacgagatgtttggcatggtgccccaggtgatgcat
tcccaccccagcgtttctcagcagagtggcttggttcaagcagatgcgaagcacctgggg
gtgtccagggagtctttgccccccatcatgaccttccagctggttcccaagggcagcata
agccagcaagcactgccgcagcaggcccagtcaaactgcgctcagaacatggctggccct
cttagctccatgtaccagatcccagatctagcccagctgcccagcgcctcgttctccatg
gctgccatccctcagcaggacggccaggtggctcagacggtcctcccggcctaccaccag
ttccagagctcgatggggaagtaccccacgcctccctcccagcacagctgctactcctcg
gccacagaacggactcctagccacaaccggcacttacaaggggagcacccgtacctgact
ccgtcgcccgaatctccggaccagtggtcgagctcttccccacactctgcctctgactgg
tctgacgtggcaaccagtcccagtaacaaccagcgcgggccagcggccgcccacatgacg
gagcagcagcggaacaacatgcaggtgtacgcctga
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integrated database retrieval system
