Taeniopygia guttata (zebra finch): 100224759
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Entry
100224759 CDS
T01082
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100224759 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100224759 (TAF5)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100224759 (TAF5)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100224759 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100224759 (TAF5)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100224759 (TAF5)
STAGA complex
100224759 (TAF5)
TFTC complex
100224759 (TAF5)
SAGA complex
100224759 (TAF5)
SLIK complex
100224759 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
CDK5RAP3
PEP5_VPS11_N
WD40_like
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
100224759
NCBI-ProteinID:
XP_030132202
Ensembl:
ENSTGUG00000010278
UniProt:
H0ZJ49
LinkDB
All DBs
Position
6:22664317..22674616
Genome browser
AA seq
783 aa
AA seq
DB search
MAALHEEPAEVAAVQPDPEAGTPPPPPAVPPAAAPAPAPATVVEGEATGAGGDAAPLKPA
APGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGATALSPTSAGLLG
GSGSEADSGEALLGRGSGAAAVAIGGSVAAVATSSPGVAAVAAVPPGKVGGVVVVEDQPD
VSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHE
SEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLL
KRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLL
KEPEFDVPLDDEDEEGENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSDK
LDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVW
SVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNY
LLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDSQFSPYGYYFVSGGHDRVARLWATDHY
QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAF
SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL
WDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAY
SSQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcagaggtggcggcggtgcagccggaccccgaggcg
gggacgccgccgccgccgcccgcggtgcctcccgccgccgcccccgcccccgccccggcc
accgtggtggagggagaggcgacgggagccggtggggatgcggcacccctgaagcccgca
gcgccgggcccggccgcctccccggcggcgttggaccggcagacgcttgtggccgtgctg
cagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcgtcgcgaagcccgc
ctgctcggcgatgacctgggtgccaccgcgctcagtcccaccagcgccgggctcctgggg
ggctccggcagcgaggcggactccggcgaggcgctgctcggccggggctccggcgctgct
gccgtcgccataggaggcagcgtcgccgctgtcgcgacttccagccccggggtggctgcg
gttgccgccgtgccgccggggaaagtcggaggcgtggtggttgtggaggatcagccagac
gtgagcgcggtgctgtcggcctacaaccagcaaggggacccgacgctgtacgaggagtac
tacagcggattgaaacacttcatcgagtgctccctggactgccatcgggcagaattgtct
cagctcttttatcctctctttgtgcacatgtacttggagttggtctacaatcaacatgag
agtgaggcaaagtctttttttgaaaggtttcatggggatcaggagtgctattaccaggat
gacctgcgtgtactgtcgagcttaaccaaaaaggagcatatgaaaggtaacgagaccatg
ctggatttccgaacaagcaagtttgtgctgcgcatttcccgtgactcttaccagctcctg
aagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggagcatctt
tacattgatatctttgatggaatgcctcgcagtaaacagcagatagatgctatggttgga
agcttggctggggaggcaaaacgagaagctaataaagcaaaggttttcttcggcttattg
aaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaatgaggaa
ggaaagccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagtaaaaaacag
gaccctaatgctcctccccaaaacagaattcctcttccagaactgaaagactctgacaag
ctggataaagtaatgaatatgaaggaagctgcgaggcgagtacgtcttggaccagagtgc
ctgccctccatctgcttctacacatttcttaatgcttaccagggtctgactgcagtggat
attacagatgactccagcatgattgtaggaggctttgctgactctactgtcagagtgtgg
tccgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctcagtctcattgac
aaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgagttgaag
attttatatggtcacagtggacctgtctatggcaccagcttcagtcctgatagaaactat
ctgttatcctgttccgaggatggcacagtgagattgtggagtctccaaacattcacgtgt
ttggtgggatataaaggacacaattatccagtttgggattcacagttctcaccttatggt
tattactttgtgtctgggggacacgacagagtggctcgtctgtgggctacagatcactac
cagccattacggatctttgctggccatcttgcagatgtgacgtgtacccgatttcatcca
aactccaactatattgctacaggctcagcagacaggactataaggctctgggatgttttg
aatgggaattgtgtaagaatattcactggacataagggaccaattcattcactggcattt
tctcctaatggacgattcctggctactggagcaacagatggaagagttctgctgtgggat
attggacatggcttgatggttggcgaattgaaagggcacacagacactatttatgcgctc
agattcagtagggatggggagattttagcatcaggttcaatggataacacagttcgtctg
tgggatgctgtgaaggcatttgaagatttagaaaccgatgactttactacagccactgga
cacataaacttgcctgaaaactcacaggacttgctactgggcacatacatgactaaatca
actccggttgttcacctccatttcacacgcaggaacctgctgctggctgcaggagcctac
agctcacagtaa
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integrated database retrieval system
