Taeniopygia guttata (zebra finch): 100224780
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Entry
100224780 CDS
T01082
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma
KO
K08526
retinoid X receptor gamma
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03320
PPAR signaling pathway
tgu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100224780 (RXRG)
03320 PPAR signaling pathway
100224780 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100224780 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tgu03310
]
100224780 (RXRG)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100224780 (RXRG)
Nuclear receptors [BR:
tgu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100224780 (RXRG)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
100224780
NCBI-ProteinID:
NP_001243138
UniProt:
F2Y9D4
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Position
8:28494757..28516696
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AA seq
468 aa
AA seq
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MYGNYPHFIKFPAGFGNSPVHASSTSVGLSSGLPTGSPVVEGPPSYLEPPGTAARALPSP
MGAVGSPVSALGSPYRVIASSLGSHPVALSSAPGMNFVAHASPQLNVLNNVSSSEDVKPL
PGLPGMGNMNYPSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTC
RDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSENEAESTSSGSEDMP
VERILEAELAVEPKTEAYSDVGTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTL
EDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELV
SKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGR
FAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQVT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaattatcctcacttcattaagtttcctgcgggctttggcaattccccggtg
cacgccagctccacgtctgtgggcctgtcctcgggccttcccacggggagcccggtggtg
gaggggccccccagctacctggagccccccgggaccgctgcgagggcgctgccgtcgccc
atgggtgccgtcggctccccggtgagcgccctgggctcgccctacagggtcatcgcctcc
tcgctgggctcccaccccgtcgctctgtcctcggcccccggcatgaatttcgtggcacac
gccagcccacagctcaatgtcctgaacaatgtcagcagctcggaggatgtcaagcccttg
ccgggtctcccggggatggggaacatgaattatccatccacgagtccaggatccctagcc
aaacacatctgtgccatctgtggggacaggtcctcagggaagcactatggggtgtacagc
tgtgagggctgcaaaggcttcttcaagaggacgatcaggaaggatctgatctacacctgc
cgggataacaaggattgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgc
tatcagaagtgcctcgccatggggatgaagagggaagctgtgcaggaggagaggcagagg
agcagggagcgcagtgagaacgaggccgagtccacgagcagtggcagtgaggacatgccc
gtggagaggatcctggaagctgagctggcagtggagcccaaaacagaggcatacagtgac
gtgggcacagagagctcgacaaatgacccagtcaccaacatctgccacgctgctgacaag
cagctcttcacactggtcgagtgggccaagcgcatcccccacttctccgacctgacgctg
gaagaccaagtcattctcctccgggcaggctggaatgagctgctcattgcctctttctcc
catcgctccgtgtcagtccaggacgggatcctgctggccacgggcctgcacgtgcaccgc
agcagtgcccacagcgctggcgtgggctccatctttgacagggttttgacagagctggtg
tccaaaatgaaagacatgcagatggataagtcggagctggggtgcctgcgagccattgtc
ctgtttaacccagatgccaagggtctgtccagcccctcagaagtggaatctctccgggag
aaggtctatgccacgctggaagcctacacgaagcagaagtaccccgagcagccaggacgg
tttgccaaactcctcctgcgcctgccggcgctgcggtccatcgggctgaagtgcctggag
cacctcttcttcttcaagctgattggagacacccccatcgacacctttctcatggagatg
ctggagacacccctgcaggtcacttga
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