Taeniopygia guttata (zebra finch): 100224922
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Entry
100224922 CDS
T01082
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03420
Nucleotide excision repair
tgu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100224922 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
100224922 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100224922 (ERCC8)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100224922 (ERCC8)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100224922 (ERCC8)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100224922 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
ANAPC4_WD40
WD_LRWD1
NBCH_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_HPS5
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
100224922
NCBI-ProteinID:
XP_002188407
Ensembl:
ENSTGUG00000002687
UniProt:
A0A674GKK3
LinkDB
All DBs
Position
Z:complement(54468885..54499206)
Genome browser
AA seq
399 aa
AA seq
DB search
MLGLMAARQAGLDDPARLRRAERTRRVLSLELNKDRDVERIHGSGINTLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPSYTCKAFFSVGRSHPDVHKFSVETVQWYPHDTGIFTSSSF
DKTLKIWDTNTLQPADIFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSSSH
ILQGHRQEVLAVSWSPRHEYVLATGSADGRVKLWDVRRASGCLSTLDQYNGEKSKASSET
ANTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKFAI
SCGCNPEFVFVPYGSTIAVYTVFTGELITMLRGHYSTVNCCVFQPHFQELYSGSKDCNIL
AWIPAPREPVPDDISEKSLPQQCVNPAYEDAWSSSDDEG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgttggggctcatggctgctcgccaggccgggctggacgaccccgcgcggctgcggcgg
gccgagcgcacccggagggttttaagtttggaattaaataaagatagagatgtggaaaga
atacatggaagtggtatcaacacccttgacatagagcctgttgagggaagatacatgtta
tctggtggatcggacggtgttattgtactttatgaccttgaaaatttgagcaggaaacca
agttacacatgtaaagcatttttttcggttggaaggagtcatcctgatgtacataaattc
agtgtggagacagtccagtggtatcctcatgacactggcatatttacatcgagctcattt
gataaaaccttgaaaatatgggatacaaacactttacaacctgcagatatatttcacttt
gaagggacagtctatagccatcacatgtctccagttgctacaaagcattgcttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatccagttctcac
attctgcagggtcacagacaagaagtattggcagtgtcttggtccccacgtcacgaatat
gttttggcaacaggaagtgctgatggtagagtaaaattatgggatgtgaggagagcttct
ggatgtctgagtacacttgatcagtacaatggagaaaagtccaaagcatcttctgagaca
gcaaacactgctcacaatgggagagttaatggtttatgctatacaaatgatggacttcac
ctgctaactattggtacagatgatcggatgcgactctggaatagctccactggagaaaac
accttagtgaactatgggaaagtctgtaatgaaagtaggaaaggactcaaatttgccatc
tcttgtggctgtaatcccgagtttgtctttgttccatatggaagtaccattgctgtttat
acagttttcacaggcgagctgataactatgcttagagggcattatagtactgtcaactgc
tgtgtatttcaacctcattttcaggaactttatagtggtagcaaagactgcaatatcctt
gcgtggataccagctccacgagagccagttccggatgatatttctgaaaagtctctgcct
caacaatgtgtaaatccagcatatgaagacgcatggagcagcagtgatgatgaaggctga
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