Taeniopygia guttata (zebra finch): 100225002
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Entry
100225002 CDS
T01082
Symbol
LAMA3
Name
(RefSeq) laminin subunit alpha-3 isoform X1
KO
K06240
laminin, alpha 3/5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04382
Cornified envelope formation
tgu04510
Focal adhesion
tgu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100225002 (LAMA3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100225002 (LAMA3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100225002 (LAMA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
Laminin_B
Laminin_G_3
EGF_LMN_ATRN
WXG100
Motif
Other DBs
NCBI-GeneID:
100225002
NCBI-ProteinID:
XP_030121952
Ensembl:
ENSTGUG00000010481
LinkDB
All DBs
Position
2:106467018..106576903
Genome browser
AA seq
2904 aa
AA seq
DB search
MLQIFSLQMCSSACQCHGAGVLGSDCDGSTGQCRCRTGFAGFSCDTCAAGYFQYPFCQVC
ECNLLGTQPEVCDFLGRCLCRSEVAGLQCDSCQPGHHSFPACQACSCDGVGSLGNTCGPG
GQCLCRGNYAGLRCDQCAPGYYSYPNCLRVNSECDPAGSIGSHFGFCQCLQHVEGPTCSK
CKPLYWNLAKENPEGCTACQCDVSGTLSGVAECQQENGHCYCKSNVCGESCDTCEAGYYA
LEKKNYFGCQGCRCDVGGSLSPACSQPWGSCQCRAHVVGTTCREPEKNYFFPDLHHMKFE
IEDGTTVQGGKIRFGYDPQEFPSFSWRGYAQMSSIQNEVRITLNVEKSNLYLFRIILRYI
NPGGETLSARISACQSQPGAGAAQTKEFVFPPSKEPTFITIPGKSSTEPFSLAPGMWTVS
IMAEEVLLDYLVLLPSDYYEASLLQISVTEPCTHPRPASAEHCLFYQHLPLGRFSCVLGS
EAVQFRHGGESRRIPVRQPAPSQPVMAHITGREVNLEMTINVPQVGRYVLVFEYANEEDQ
IDTAEVTVHSPGPVTEGRVRIYSCKYSFLCRSVVVDDRNRVAAYDLLADTKIRLKASSSN
FLLHKVCIISAEEFSPEYVDPKVQCIAAYRSNSDGSAACIPSVFETPPGALVLDAFKDGK
ISEVEENILHDPLSATLPAGSFRGVTLTPLQNQITLSGRVPHMGRYVFVVHFYQPAHPVF
SVQVHVNAGHMWSGTFNASFCPHTSGCRVQVVAANQIEFDISEPMVSVTVMIPDGRMLVL
ENILVVPADTYSYKILDKKTVDKSFDFISQCGGNSFYIDPERSSAFCKESARSLVAFYNN
GALPCACHSAGAASPACSPLGGQCVCRPNVIGRQCSRCQTGYYGFPFCKLCNCGQRLCDD
ITGKCICPPRTVKPKCEVCEKYYFSYHPLAGCKSCNCSEKGIVDVASPECDKTSGQCKCK
PGIKGRQCDQCAPGTYGFPNCVPCSCNRDGTEPDVCDPQTGICLCKENVEGATCDTCRRG
SFYLNPSNPWGCTPCFCFGATSSCRSTDRRRTKFVDMRNWRLEAVDERMDIPVTFNPVSN
SVVADVQELPASVHNLYWKAPPSYLGEKLSSYGGFLSYQVKSFGLPSEGMVLLDKKPDIR
LTGKQMEVVYMDPNNPLPDRQYYGRVQLVEGSFRHAISGKLVSREELMTILSRLEGLHIR
ALYFTETQRLTLGEVGLEEATSEGSGSIAHSVEVCACPPEYAGDSCQECSIGFYRENKGI
FAGRCVPCNCNGNSNRCRDGTGKCIDCQYNTAGEKCEHCKDGYFGDATQGSCRECPCPYT
NRFAAGCVANGEEIQCLCKEGYTGARCERCAPGYFGNPQKYGGFCQKCNCNNNGQLASCD
HLTGECFNNEPKDVDPNEDCDSCDSCVITLLKDLSTIGDELQLIKSQLQNVHASSHTLEQ
MRDLETRIKDLKVLLNNYRSVVHNQGSKVDELETEFIKLNRDVDALQEKAEMNYKEAERL
FNNFGQTHQKGKDLVSQIQIVVNNIRVLLEQVAGTNAEGNNLPLGDASEELAEAQRMMAE
MRSRSFGQLQAEAEKERTEAQQLLARVKNELQKYHQENRGLIKAVRDALNEYESKITDLR
EALNDATAQIKQAEGLNKDNTVLLEDIKKRIEETNVQQSGVLNILSSARSSLTQAKSVLG
LLQESKEEYESLAAQLDGARKDMNEKVANLSSASKEPLVVRAEEHAKSLQDLAKQLEEIK
NSARRDELVGCAVEASTAYDNIIGAIKAAEEAASQAGKAADSALSTVKREDLSGKAARLK
TESSALTDQAQETKRTLQAIGPNLEDLKQRLDVTDGKMNALKIDLVTAQNNLNGINRGDI
DSIITSAQSMAENANSVTNSVLGELVPIEAEVERIRSNYGSTQSDSFNKALMEANNSVKN
LTNQLPDLFSKIKSINQQLMPISNISENINRIRELIQQARDAANKVAIPMRFNGSSGVEV
RPPSNLEDLKGYTSLSLFIQRPQPRSDTQQRANRFVLYLGNKNASKDYIGMAVKDGYLTC
VYNLGGGDGEVRVQSLVTQSDTEEAVMDQVTFERIYQYAKLRYIKAATSISPDYESPRSA
SSGDSDMLLNLDPSSVVFYVGGYPPDFRPPDNLNYPRYEGCIELNSLNEHIVSLYNFKRT
FNLNTTEVQPCRRYKEETDQSYFEGTGYASVTAGERSGERVRYEQTIETTADEGIVFFAA
NGDQFISVLIRNGHTVFRYKLHSETPEEVEAKKTVNDGTYQQINLVLDRRNKVVYVSPGI
RANIQVFNFTEYYLGGVPSFLREQFNISTPPFRGCMKNVKNPSTASVVFDKTFGVSKKCS
DDWKLVRSAAFSKDGTLSLSAADFPFPKDFQVGFGFQTTASAGTLLTYNLRPDVLSIFLS
PGSVTAKIRDKEIKLEKKYEDGSMHYVTVIKTGSRVHMMVDDESKAIDSPRSSSSQESNR
PIKFGGDHFEGCISNIFIERAGQLPEVQNLVANTGKTGVSLGACQEYENLEPMLLQEFKN
PLRLKMLKNEKYLDYLKAANMQNHTIPAPLHDSSEAYLLGSNPNSFISYMFSPLLSTDRL
HFSVDVRTRSSRGLIVFMEESSEDSYMALHISKGRFVFSLGSGEKQIKVKTNIKYNDGQW
HTVVFSTDGKNARLVVDGLRSQHRKLVTNSAINIRPPVYVGGLPPLKRQNMPMKSFKGCL
RNFKMNGKAMNTPQQKNGVLPCLDVPMDTGIYFFNEGGYITIGNLLMSVDFKIVFTIRPR
SSTGVLLHAGSKQDNYLTVYMKGGKVIAAGNSDAGEFQASVIPKKPLSDGRWHTIAVSQK
ENTVQLEVGTQSNYTTVLQPSPPRRVYQPLYFGKIPANLDTLWLPVEDPFFGCLRNITIN
DKHVSTRRISEIHGSVNLHGCPEK
NT seq
8715 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaatattttctttacaaatgtgctcttcagcatgccagtgccacggtgcagga
gtgctgggcagtgactgtgatggaagtaccgggcagtgcagatgtcgaactggatttgcg
gggttttcctgtgatacctgtgcagctggctactttcagtaccccttctgccaggtgtgt
gaatgtaacttgttgggtacccagcccgaagtctgtgattttcttgggaggtgcctttgt
cgctcagaggtcgctggacttcagtgtgacagctgccagcctggccaccactcattccct
gcctgtcaagcgtgcagttgtgatggtgttggctcattggggaatacctgtggtcctgga
gggcagtgtctgtgccgtggtaactatgctgggctgagatgtgaccagtgtgctccaggc
tattacagctatcccaactgcttgcgtgtcaacagcgagtgtgaccctgcaggtagcatt
ggttctcactttggattttgtcagtgtctccagcacgtggaaggtcctacctgcagtaaa
tgcaaacccttgtattggaacctggccaaagaaaaccctgagggatgtacagcatgtcag
tgtgatgtgagtggaacactaagtggagttgcagaatgtcagcaggaaaatgggcattgc
tactgtaaatctaatgtttgtggagaatcctgtgacacttgtgaagctggttattatgct
cttgaaaaaaagaattattttggctgccaaggctgccgctgcgatgttggaggatccctg
agcccagcctgctcccagccctggggcagctgccagtgcagggcgcacgtcgtgggcacc
acctgtcgggagcctgaaaaaaactatttttttcctgatctgcaccacatgaagtttgag
attgaagatggtactactgtccaaggagggaaaattcggtttggctatgatcctcaggaa
tttcctagcttcagttggagaggatatgcgcagatgtcctctatacaaaatgaagtaagg
ataactttgaatgtggaaaaatcaaacctctacttatttcgcattatcctgaggtatatt
aaccctggaggggaaacattgtctgctcgcatatctgcttgtcagtctcagcctggagca
ggggctgctcaaaccaaagaatttgtcttcccgcccagcaaagagccaacttttatcaca
atcccaggaaaaagttccacagagcctttctcactggctccaggcatgtggactgtcagt
ataatggcagaggaagtcctcttggattatctggtgctgttacctagtgattactacgag
gcatccctgttgcagatcagcgttacagagccttgcacacatcccaggcctgcttcagca
gaacactgcttgttctatcagcatttgcccctgggcagattttcctgtgtccttggttca
gaggcagtgcagttcagacacgggggagaatccagaagaatacctgtgcgacagccagct
cccagtcagccagtgatggcccatatcactggaagagaggtcaatttagagatgaccata
aatgttcctcaagtgggtcgctatgttctggtttttgaatatgccaacgaagaggatcag
atagacactgcagaggtaacagtacatagccctggacctgtcactgaaggcagagtgaga
atatacagttgtaaatacagtttcctttgtcgcagcgttgtagttgatgacaggaatcgc
gttgcagcctatgaccttctggcagacacaaagatacgtctgaaagcgtcatcaagtaat
tttcttctgcacaaggtttgcattatatcagctgaagaattttctccagaatacgtggat
cctaaagtacagtgtatagctgcttacaggagtaacagtgatggaagtgcagcatgcatt
ccctcagtttttgaaactccaccaggagctttggttttggatgcattcaaagatgggaag
atttctgaagtagaggagaatatactccatgatccactgagtgccaccttacctgctggt
tcatttcgtggagtcaccttgacaccattacagaaccagataaccttgagcggcagagtg
cctcacatgggcagatatgtatttgtggtacatttttatcagccagcacacccagtgttc
tctgtgcaagtccatgtgaatgctggacatatgtggtcaggtactttcaatgcttcattc
tgccctcatacttctggctgtcgggttcaggtggttgcagcaaaccaaattgagtttgac
atttctgaacccatggtctctgttacagtaatgataccggatggaagaatgctggttctg
gaaaatatcttagttgttccagcagacacctacagttacaaaattcttgacaaaaagaca
gtggacaagtcatttgattttatcagccaatgtggaggaaacagtttttatattgaccca
gaacgatcatcggccttctgtaaggagtctgcaaggtcactggtggctttctacaacaac
ggagccctgccatgtgcttgccacagcgcaggtgccgctagccctgcatgcagccccctg
ggagggcagtgtgtctgcaggcccaacgtcatcggtcgccagtgcagccgatgccaaacc
ggctactatggattcccattttgcaagctatgcaactgtgggcagcgtctttgtgatgat
ataactggtaaatgcatttgccctccacgaactgtgaagccaaaatgtgaagtgtgtgag
aaatattacttcagctatcatccccttgctggctgcaagagctgcaactgctcagaaaaa
ggaattgttgatgtggcaagcccagaatgtgataaaaccagtgggcaatgcaaatgcaaa
ccaggaataaaaggacgtcagtgtgatcagtgtgctcctggaacttacggtttccctaac
tgtgtgccatgcagctgtaacagagatggaacagaaccagatgtttgtgatccccagaca
ggaatttgtctttgcaaggagaatgttgaaggtgcaacatgtgacacttgcagacgagga
tccttttatctgaacccttctaacccctggggatgcacaccttgcttttgttttggggca
accagcagctgtcgcagcacggatcgtcgtagaaccaagtttgtggatatgaggaactgg
cgcttggaggcagtagatgaacgtatggacattccagtcacttttaatccagtcagtaac
agtgtggtggctgatgttcaagaactgccagcttctgtgcataatttgtactggaaagca
ccaccgtcttacctgggagagaagctttcttcatatggtggcttcctaagttaccaagtg
aaatcttttggcttacctagtgagggcatggttcttctggataagaaacctgatatacga
ctaacaggcaaacaaatggaagttgtttatatggatcccaacaacccactgcctgatcgt
caatattatggccgagtgcagctggttgagggcagcttcaggcacgccatcagcggtaag
ctggtatcccgagaagagctgatgaccatcctgtccaggctggagggcttgcacatccgg
gccctgtacttcacggagacccagcgcctgacgcttggtgaggtggggctggaggaggcc
accagcgagggcagtggcagcatcgcgcacagcgtggaggtgtgcgcctgcccgccggag
tatgccggtgactcatgccaggagtgcagcattggattttatcgtgagaacaaaggaata
tttgctggacgctgtgtgccctgcaattgcaatggaaattcaaatagatgtcgagatggt
actggaaaatgtattgactgccagtataatactgctggggagaaatgtgagcactgtaaa
gatggttattttggagatgccacgcagggttcctgccgggaatgcccttgcccatataca
aacagatttgcagctggctgtgtggcaaatggtgaagaaatccagtgtctctgcaaagaa
ggctacactggagctcgttgtgaacgctgtgctcctggatattttggaaatccacagaaa
tatggaggcttctgtcagaaatgtaactgtaataataatggacagctggctagctgtgac
cacctgactggagaatgtttcaataacgaaccaaaagacgtggatcccaatgaagattgt
gactcctgtgacagctgtgtgattacactgctgaaggatttgagcacaataggtgacgag
cttcagctcatcaagtctcagctgcaaaatgtccatgcaagttcccacactctggagcag
atgagagacctggaaacacgcatcaaggacttaaaggtcttattgaacaattaccgctct
gttgtccacaatcaaggttcaaaggtagatgagttggagacagaattcattaaactaaat
cgtgatgttgatgctctccaggaaaaggctgaaatgaactacaaagaagctgagagatta
tttaacaattttggccaaactcatcaaaaaggaaaggatttggtttcacaaatacaaata
gtggtcaacaatatacgagtgctcttggaacaggtagctggcacaaatgcagaaggtaac
aacctgcccctgggagatgcctctgaagagctggccgaagctcagcgcatgatggcggag
atgcggagccgcagctttggccaacttcaagctgaggcagagaaggagcggacggaagct
cagcagttactggcacgtgttaagaatgaactacagaagtaccaccaagaaaatcgtggg
cttattaaggctgtgagggatgcactgaatgaatatgaatccaaaatcactgaccttcgt
gaagctttgaatgatgcaacagctcaaatcaagcaagctgaaggcttaaacaaagacaat
acagttctgttagaagacattaagaaacggattgaggagacaaatgtgcaacagagtggt
gtcttgaatattctgagctcagcccggtcttccctgacgcaagctaagagtgtacttgga
ttattgcaagagagcaaagaggaatatgaaagcctggctgctcagctggatggagcaagg
aaggatatgaatgaaaaagtggcaaatctctcatcagcaagcaaagaaccactggtggtg
agggccgaggaacatgccaaatctttgcaagatttggcaaaacaactggaagaaataaag
aacagtgccaggagggacgagttggtaggctgtgctgtggaagcttctactgcctatgac
aatattattggtgccattaaggcagcagaggaggcagccagccaagctgggaaagcagct
gactcagctttatcaactgtgaagagagaagacctatcaggaaaagctgcaaggttaaaa
actgagagcagtgcactcacagatcaagcacaggagaccaaaaggacattgcaagctatt
ggtcctaaccttgaagacctaaagcaaagacttgatgtcactgatggaaagatgaatgca
ctgaaaattgatcttgtcactgctcaaaataatctcaacgggataaacagaggtgacatt
gacagcatcatcaccagtgcacagagcatggcagaaaatgccaactctgtcaccaatagt
gtgttgggtgaactggtcccaattgaagcagaagtggaaagaattaggagcaactatgga
agcacacagagtgacagcttcaataaagcactgatggaggcaaacaattcagtaaaaaat
ttgacaaaccaacttccagatctgttcagcaagatcaagagtatcaaccaacagctgatg
ccaataagcaacatctctgagaacataaatcgcataagagaactgattcagcaggcaaga
gatgctgcaaataaggttgctattcctatgaggttcaatggcagctctggtgtagaggtt
cgacctccgagcaaccttgaagatctaaagggctatacttcactttccttatttatccag
agacctcagccaagatcagacacacagcagagggcaaatagatttgtcctgtacctgggt
aataaaaatgcttccaaggactacattggtatggctgtgaaagatggttaccttacttgt
gtctataacctgggaggtggtgatggggaagtgagggtgcagtcattggtgactcaaagt
gacactgaggaagctgttatggatcaagttacatttgaaaggatttaccagtacgcaaag
ctgaggtacatcaaagcagcaacatcaatttctccagattatgaaagccctaggagtgca
agcagtggagacagtgacatgctcctcaatcttgatcccagcagtgttgtcttttatgtt
ggaggatacccaccagattttaggcctccagataatctcaactatcctcgttatgaaggc
tgcattgaattaaacagcctaaatgagcatattgtcagcctttacaacttcaagaggact
tttaatctcaacaccactgaagtgcaaccctgcagaaggtataaagaggagactgaccaa
agctattttgagggcactggttatgccagtgtcacagcaggagaaagaagtggcgaacga
gtacggtacgagcagacaattgagacgactgcagatgaaggcattgtgttctttgcagca
aatggggatcagttcatcagtgtgctcattagaaatggtcatacagtttttagatacaaa
cttcactctgaaactccagaagaagtagaagccaaaaaaacagtaaatgatggaacatat
caacaaattaatttggtgcttgaccgaagaaacaaagttgtgtatgtcagtcctggtatt
agagccaatatacaagtcttcaatttcactgagtactatctaggtggagttccatctttt
ctacgggaacagtttaatatatccacacctccattccgtggctgcatgaagaatgtgaaa
aacccaagcactgcatctgttgtttttgataagacttttggtgtcagcaagaagtgttca
gatgactggaagcttgtcagatctgcagctttctccaaggacggaacactgagccttagt
gcagcagatttcccatttccaaaagatttccaagtgggctttggctttcagacaacagct
tctgctggaactctcttaacttacaacctacggcctgatgttctttccatctttctgagt
cctggctctgtaactgcaaagatacgagataaggaaattaaactggaaaaaaaatatgaa
gatgggtcaatgcattatgtgacagtaataaaaacaggcagcagagtacatatgatggtt
gatgatgagtcaaaagcaattgattctcccaggtcatccagctcacaggaatcaaacaga
cctataaaatttggtggagatcattttgaaggttgcatctcaaacatctttattgaaagg
gcaggtcagctccccgaggttcaaaatcttgttgctaatactggcaagactggtgtgtcc
ctcggagcttgccaggaatacgaaaaccttgaaccaatgctgctgcaggaatttaaaaat
cctctcaggctcaagatgctcaagaatgaaaaataccttgattatttgaaagctgctaac
atgcaaaaccacactataccagctccattacatgacagcagtgaagcatatctccttgga
agcaaccccaacagtttcatatcctacatgttttctccgttgttatccacagacaggtta
catttctctgtagatgtacggactcgatcatcaagaggattaatagttttcatggaggaa
agctctgaggactcttatatggctctccacatttcaaaaggacgatttgtcttttcactt
ggctctggagaaaaacaaatcaaagtcaaaaccaatattaaatacaatgatggacaatgg
cacactgtggtcttcagcacagatgggaagaacgcccgccttgttgttgatggtctaagg
tcccagcacagaaaattggtaacaaattctgccatcaacattaggccaccagtgtatgtg
ggagggctgccaccactgaagagacagaatatgccaatgaagagtttcaagggttgtctg
aggaattttaagatgaatggaaaagccatgaatacccctcagcaaaaaaatggcgtactt
ccatgtctggatgttcctatggacacagggatttacttctttaatgaaggaggatatatc
accattggtaatttgctgatgagtgtggatttcaagattgtatttaccattcgaccaagg
agttcaactggtgtactcctccatgctggaagcaagcaagacaactacttgactgtttac
atgaagggagggaaggtgattgctgctggaaatagtgatgctggagaattccaggcatca
gtcatacctaagaaacctctgtctgatggacggtggcataccattgcagtctctcagaag
gagaacacagtgcagctagaggtgggcacacagagtaattataccactgtacttcaaccc
tctcctcctagacgtgtgtatcagccactctactttggcaaaattccagcaaatttggac
accctgtggcttcctgttgaagacccattttttggctgtcttcggaatattaccatcaat
gacaaacatgtctccaccaggagaatttcagagattcatggttcagtgaacttgcacggg
tgcccagagaagtaa
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integrated database retrieval system
