| Entry |
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| Symbol |
COL15A1
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| Name |
(RefSeq) collagen alpha-1(XV) chain isoform X1
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| KO |
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| Organism |
tgu Taeniopygia guttata (zebra finch)
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| Brite |
KEGG Orthology (KO) [BR:tgu00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:tgu00535]
100225058 (COL15A1)
Proteoglycans [BR:tgu00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100225058 (COL15A1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(72291784..72415528)
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| AA seq |
1297 aa
MLSWHAWWTWDLSLLLFGLSIHAGAAAQIIEERGSKRHLDLTELIGVPLPPSVYFVTGYG
GFPAYSFGPDSNIGRLTSAIIPSPFYRDFAIVVTVKPNSDHGGVLFAITDAFQKTIYLGL
RISPVDDSTQRIIMYYTEPGSHISREAASFKVPVMTNRWNKFTVTVEGNDIALFMDCEEY
QRLQFQRPARTLVFESGSGIFVGNAGATGLEKFTGSIQHLTIKSDPRATEDHCEDDDPYA
SGDSSGNGRIQEHDSSEAQEALAPSRLPIRPEDTLAEPVEAPPTILAYLEENDFSGNHRS
EETSEADKFKEQAVMETGQGNSESTTVTQKMLREEDGSGADVLPGVSREEGQKGQEEEDG
STESIGGSGIDVENKDQRPPESPGKLGQLGQPGIPGKNGLPGKNGLQGLPGLKGKAGPKG
EKGDPGEGLPGPPGLPGPTGPSAPSRGLNRLEPEELGSGDSDRETEILRGLPGPPGPPGL
PGLPGNPAPDSSVGPPGSPGEDGASGEPGPAGPQGPPGCDGVVGPPGWKGEKGDQGLPGS
AGPKGDAGVTGSIGPKGEAGPIGSPGKPGPPGPPGPPGPPGPPGLSYSLGFEDMEGSGSI
NLLSESRIPGSRGPKGSAGRPGHRGPLGPKGERGNIGPPGSKGMPGTDGKPGFPGIAGHP
GEVGPKGEKGDPGLRGEPGQDGRSIVGPPGPPGPPGSVIAIPELLLNNTDGISNFAEIKG
LLGPPGPDGKPGLPGFPGPRGPKGDTGLPGSQGPKGQQGEKGEPGAIISADGSLTELLGR
KGEKGEAGVMGPVGPMGPIGPTGPKGELGFPGRPGRPGLNGLRGVKGDRGEALNGLPGLP
GPPGPPGPPGRILFIKGVSTVFPVPPRPHCKMPVNPPYTGNQEVLNDHGAKANGDSWELH
SSAHLKGEKGDRGAPGPPGPPLPPSYFSHFINSIKGEKGDNGVTGVKGEKGEPNGGFFLT
GPPGPPGRPGLIGPKGDSVVGPRGPPGLPGLPGLPGYGKIGPPGPPGPPGPPGPPAIYGS
AAAMPGPPGPPGEPGSPATRNLVTTFQNIEGMLEKVHYVAEGTLIYLRETSEVFIRVQKG
WRKLQLGELIPIPADSLPPPAISSHGIQSIPALRPISNMKNGKPALHLVALNFPLSGDMR
ADFQCFQQAQLAGLTSTYRAFLSSHLQDLATVVRKADRHNLPVVNLQGETLFSNWESIFD
GNGGQFNIHVPIYSFDGRNVMTDSSWPQKIIWHGSTANGIRLVSNYCEAWHTADMGAIGQ
ASPLNTGKLLDQKVYSCNNQFIVLCIENSFVSDPQGK |
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| NT seq |
3894 nt +upstreamnt +downstreamnt
atgctctcgtggcatgcctggtggacctgggacttgtcgctactgctctttggcttgtca
atccatgctggtgcagcagctcagatcatagaagaacgaggctcgaaaagacaccttgac
ctcacggagttaataggagtccctcttcctccttctgtctactttgtcacgggatatgga
gggttcccagcttatagctttggtccagactccaacatcggccggctgaccagtgctatc
ataccgtcacctttctacagagattttgctattgtggtcaccgtgaaaccaaacagtgat
catggaggagtgctctttgcaataacagatgccttccagaaaacaatctacctaggactg
aggatttcacccgttgatgatagcacccagagaataatcatgtactacacagagcctgga
tcccatatctcccgagaagctgcttcctttaaagtgccagtgatgactaacaggtggaat
aaatttactgtgactgttgaggggaatgatattgctttgttcatggactgtgaagagtat
cagaggcttcagtttcaaaggcctgctcgaaccttggtatttgaatctggctctggcata
tttgttggtaatgcaggagccacaggcctggaaaagttcacaggctcaattcaacatctg
acaatcaaatctgacccaagggctactgaggatcattgtgaagatgatgacccttatgct
tcaggggacagcagtggcaatggccgcattcaagaacatgacagttctgaggcacaagaa
gcccttgcaccttcccgtcttcccataaggcctgaagatacgttggctgagccagtggaa
gcgcccccaaccatattggcttatttggaagagaatgatttctctggaaatcacagatca
gaagaaacctcagaagcagataaatttaaagaacaagctgtcatggaaactggacaaggc
aacagtgagtctaccactgtcacacagaaaatgttaagagaagaagatggctctggtgct
gatgttttgccaggagtaagcagagaggagggccagaaaggtcaggaagaagaggatgga
tccacagagtctataggagggtcaggaatagatgtggaaaataaagatcaaagacctcct
gaatctcctgggaaacttgggcaacttggtcagcctggcattcccggtaaaaatggacta
cctggtaaaaatggacttcaggggttgccaggactgaaaggaaaagcaggccccaaaggt
gaaaagggtgatcctggtgagggattgccaggaccccctggactaccaggacccacagga
ccatctgctccttccagaggattaaatagactagaacctgaagaattgggttctggagat
tctgatagagagacagagattttaaggggtcttccagggccaccaggccctccaggactg
cctggtcttccaggaaacccagcacctgattcaagtgtaggacctcctgggtcaccagga
gaagatggagcttcaggggagccaggccctgcaggccctcaaggtcctcctggttgtgat
ggagtggttggcccaccaggatggaagggagaaaagggtgatcaaggtctgcctggttct
gctggtccaaagggtgatgctggagttactggatcaataggccctaaaggagaagctggt
cctattgggtctcccggaaaacctggaccacctggacctcctgggcctcctggacctcct
ggaccaccaggactaagttacagcttgggatttgaggatatggaaggatcaggtagcatc
aacctgttaagtgaatcaagaattcctggatcaaggggaccaaagggttctgcaggaaga
cctggacatcgtggacccttaggaccaaagggagaaagaggcaacataggtcccccaggt
tcaaaggggatgccaggcacagatggaaaaccaggcttccctggcattgctgggcatcct
ggagaagtgggtccaaaaggagagaaaggtgacccaggacttcggggtgaaccaggacag
gacgggaggagtattgtgggaccaccaggaccaccaggaccaccagggtcagtcatagca
atacctgagttacttctcaataacacagatggaatttctaattttgctgaaattaaagga
cttcttgggccgccagggccagatggcaagccaggtctaccaggatttcctggccctcga
ggtccaaaaggtgacactggtttgcctggatcacaaggacctaaaggacagcagggtgaa
aagggagaaccaggagctatcatttctgctgatggatctttaactgaattattaggaaga
aaaggagagaagggtgaagctggagtgatgggaccagtgggaccaatgggaccaatagga
cctactggacccaaaggagagcttggcttcccaggacgtccaggccgtccaggactgaat
ggtctgagaggtgtgaaaggtgatcgaggtgaagcacttaatggccttcctggcttgcct
gggcccccagggccccccggacctccaggacgtatactttttatcaaaggagtaagtaca
gttttcccagtccctcccaggcctcattgcaaaatgccagtgaaccctccctatactgga
aatcaagaagttcttaatgaccatggcgccaaagcaaatggagattcctgggaactgcac
agttcagcacacttaaagggagaaaagggagacagaggtgctccaggaccaccaggtcca
cctctgcctccatcatatttcagccattttattaatagcataaagggtgaaaaaggagac
aatggagtcaccggtgtaaaaggagaaaaaggagaaccaaatggagggttttttctgaca
gggcctcctggaccacctggaagaccaggattaattggaccaaaaggggactcagttgtt
ggacccagaggacctccaggattacctggcctacctggcttaccaggttatggaaaaatt
ggacctcctggcccacctggaccacctggaccaccaggcccccctgcaatatatggctca
gcagctgcaatgcctgggccaccaggtcctcctggagagccagggtcacctgccaccagg
aatctggttacgacattccaaaacattgagggtatgttggaaaaagttcattatgtagca
gaaggtacactaatctatctgagggaaaccagcgaggtttttatccgtgttcagaaagga
tggagaaaattgcagcttggtgagctaattcctatccctgctgacagccttcctcctccc
gccatatcaagccatggaattcagtctattccagcattgagaccaatatcaaatatgaag
aatggaaaaccagcattgcatttggtggctttgaacttcccattgtctggtgacatgcga
gcagattttcagtgttttcagcaggcccagcttgctggtttgacatccacctacagagcc
ttcctctcatcacacttgcaagatctggccacagttgtcagaaaagcagaccgacacaat
ttgccagtagtcaatcttcagggagaaacccttttcagtaactgggaatctatatttgat
ggaaatggtggacaattcaacattcatgttccaatatactcctttgatggcaggaatgtc
atgactgattcatcttggcctcaaaaaataatatggcacggttcaactgcaaatgggatc
cgactggttagcaactactgtgaagcctggcacacagctgatatgggagctataggacaa
gcatcgcctctgaacacagggaaacttcttgaccagaaagtatatagctgtaataatcag
tttattgttctctgtattgaaaacagttttgtatctgatccccaaggaaaataa |
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