Taeniopygia guttata (zebra finch): 100225070
Help
Entry
100225070 CDS
T01082
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100225070 (KDM1B)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100225070 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox
Pyr_redox_2
FAD_binding_3
Pyr_redox_3
HI0933_like
FAD_binding_2
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
KARI_N
NAD_binding_7
ThiF
RGS
Shikimate_DH
zf-RING_2
YjeF_N
Motif
Other DBs
NCBI-GeneID:
100225070
NCBI-ProteinID:
XP_002190331
Ensembl:
ENSTGUG00000006257
LinkDB
All DBs
Position
2:68191669..68219971
Genome browser
AA seq
820 aa
AA seq
DB search
MSTGRLRTKKKACSSDHSPDNLPVRSSGRQVKKKAAEAADDDDEASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKTE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNVTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMERILYFMTRKGLI
NTGILSVSPDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFTGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVALGEKIQEIYKAFIQESGIQFCELEEKVLQFHLSN
LEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIRLNFPVQSID
YSGEEVQITTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSTQRGLFSVFYDMDPEGKESILMSVVTGDAVTTIK
NLDDQQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSNDHWLQMAYSFVKTGGSGEAYDMI
AEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgggaaggctacgaacgaagaaaaaggcatgttcttcagatcactctccagac
aaccttcctgtgaggagttccggaagacaggtgaagaagaaagcagctgaagcagcagat
gatgatgatgaagcgtcagagaagaaatacagaaaatgtgaaaaagctggatgcactgca
acatgccctgtttgctttgccagtgcagcagaaagatgtgcaaaaaatgggtatacgtca
agatggtaccatctgtcctgtggggagcacttctgcaatgaatgttttgaccactattac
cgaagccataaagatggctatgagaaatacactgcctggaaaaggatttggacaagcaat
ggtaaaagtgagcccagtccaaaagcctttatggctgatcaacagcttccttactgggtg
cagtgcacaaagccagaatgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccacagatagcaaaaacctacagatgtggtatgaaactgaacaattccaccaagactgag
ggctcagaccagtgttccatgcctgaagacttgagagtggctgaagtttcagaccactgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattacccagactgcgtgggcatgagtccatcctgtaccagcactaatcggtta
cctggtgaatccaaccttgtgaagttagagcacctaaagagcgtgcctaatgtgactgtt
gcaggcatgaacaagtatttccagcctttttaccagcccaatgaatgtgggaaagcactt
tgtgtgaggccagatgtcatggaattggatgagctctatgagttcccagaatattcacga
gaccctaccatgtacctggcattgagaaacttgattttggctttgtggtacacaaactgc
aaggaggctctcacccctcaaaaatgtatccatcatataattgttcgggggcttgtgcgg
atccgctgtgtacaggaaatggagaggatcctgtattttatgacaaggaaaggactaatt
aatacagggattttgtcagtcagtcctgaccagtaccttcttcctaaggaataccacaat
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacaactgcac
aactttggaattaaggtcattgtattagaagctaaagacagaattggtggccgagtgtgg
gatgataagacgttcacaggagtcactgttggaagaggtgcacaaatcgtcaatggatgt
gtcaacaacccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactaggg
gagaaatgtgacttgatccaggaaggcggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgtcgtctctgagtggagaaaagataaaacc
cagcatcaggatgttgctcttggtgaaaaaatacaagagatctataaagcctttattcag
gagtctggtatccagttctgtgagctggaagaaaaagtactacagttccatctcagtaat
ttggaatatgcctgtggcagcaatctctctcaggtatctgctcgctcatgggaccacaat
gaattttttgcccagtttgctggagatcacactcttctaactgtgggatattcaactgta
attgataagttggcagaagggctggacatccggctgaatttcccagttcagagcattgac
tattctggtgaagaagtgcagatcactactgcagatggaacagtgtggacaacacagaag
gtattggtgactgtgccactggcccttcttcagaaaaatgccattcagtttaatcctcca
ctatcagaaaaaaaaattaaagccattaatagtttgggagcaggagtcattgagaaaatt
gccttgcagtttccatatagattttgggacagtaaaattcaaggagctgatttttttggt
catgttccacccaattccacccagcgtgggctctttagtgtcttctatgatatggatcca
gagggcaaagaaagcattttaatgtcagtggtcaccggagatgctgtgacaaccattaag
aatttagatgatcaacaagtactgcaacagtgtatgactgtactccgagagctgtttaag
gagcaggaggttcctgacccagtgaagttttttgttactcgatggagcaatgaccattgg
ctgcagatggcgtacagctttgtgaaaacggggggcagcggtgaagcttacgacatgata
gctgaagatatacaaggaaaagttttttttgctggtgaggccacaaataggcactttcct
cagaccgttacaggagcttacttgagtggggttcgagaagccagcaaaatagcagcattt
taa
DBGET
integrated database retrieval system
