Taeniopygia guttata (zebra finch): 100225147
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Entry
100225147 CDS
T01082
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100225147 (FUBP1)
03041 Spliceosome [BR:
tgu03041
]
100225147 (FUBP1)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100225147 (FUBP1)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100225147 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
100225147
NCBI-ProteinID:
XP_030135386
Ensembl:
ENSTGUG00000006841
LinkDB
All DBs
Position
8:complement(11816814..11853473)
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AA seq
682 aa
AA seq
DB search
MADYSTVPPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTAMNSNDYGYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVD
YTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAP
QCLPRPSTLGSAAKKQQTFNHH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgccgcgggcgcgcccgggggaggtggcggc
ggggctggaggagtgaacgatgcctttaaagacgcgctgcagcgggctaggcagattgca
gcaaaaattggaggagatgctggcacagcaatgaattcaaacgactacggttacggaggg
cagaaaagacctcttgaggatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgctccccag
aatgactcttttggaaatcagctaccaccgatgcatcagcagcaaaggtctgtgatgaca
gaggagtacaaagttccagatgggatggttggattcataattggcagaggtggagagcag
atctcacgcatacagcaagagtctggctgtaaaatacagattgcacctgatagtggaggc
ctgcctgaaagatcatgtatgctaactggaacaccagagtctgttcagtcagcaaaaaga
ttgcttgatcaaatagttgaaaagggaagacctgcacctggatttcatcatggtgatgga
cctggaaatgcagtccaggaaattatgattccagcaagtaaagcaggattagttattggg
aaaggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgatt
caagatggtccacagaacactggtgcagataagccccttaggataactggagatccttat
aaagttcagcaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttaga
gaggtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaata
ccacgatttgctgtaggtattgtaattggaagaaatggagagatgattaaaaagatccag
aatgatgctggtgttaggatccagttcaagccagatgatggaacaactccagatagaata
gcccagatcacagggcctcctgatagatgtcagcatgctgcagaaattattacagatctc
cttcgcagtgttcaggctggtaaccctggtgggccgggacctggtggtcgaggaaggggt
agaggccaaggcaactggaacatggggcctcctggtggattacaggaattcaattttatt
gtccctactggcaaaactggattaatcattggaaaaggtggtgaaactattaaaagtata
agccaacaatctggtgctaggatagaacttcagagaaatcctccacctaatgcagatcca
aacatgaagatgtttactatccgtggaacaccccagcaaatagattatgcacgacaactt
atagaagaaaagattggaggtccagtgaatccattgggtccacctgttccccatggtcct
catggtgttgttcctggcccgcatggacctcctgggccaccaggtcctggtgctcccatg
ggaccatataatccagctccttataacccaggccctcctggtcctgcacctcatggtcct
ccagctccatatgctccacagggatggggaaatgcttatccacactggcagccaccaaac
ccaccagacccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattat
gctcactattatcagcagcaagcacagccacctcctgcagcccctcctggtggaccagct
acaacgcaaaccaatggacaaggagatcagccaaatccagcaccagcagggcaggttgac
tataccaaggcctgggaggagtactacaaaaaaatgggtcaagctgttcctgcccctgct
ggggctcctccgggcgggcagccagattacagcgcagcgtgggctgagtactacaggcag
caggcagcgtactatgctcagacaagtccacagggaatgccacagcatcctccagcacca
cagtgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagacatttaat
catcactga
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