KEGG   Taeniopygia guttata (zebra finch): 100225173
Entry
100225173         CDS       T01082                                 
Symbol
BICC1
Name
(RefSeq) protein bicaudal C homolog 1 isoform X1
  KO
K18756  protein bicaudal C
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100225173 (BICC1)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100225173 (BICC1)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 KH_N4BP1_1st SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 100225173
NCBI-ProteinID: XP_030131678
Ensembl: ENSTGUG00000005584
LinkDB
Position
6:complement(6772365..6861824)
AA seq 979 aa
MAAQCDPLSGYLPPPLSDPGSNSERSADSPAPGSEEDSAGPPRPLHSPEWGEERFRVDRK
KLEAMLQAAAEGKGKSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKENVK
EAKEKIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQ
AEKSNQVSIAGQPAGVESARVRIRELLPLVLMFELPIAGILQPIPDPNSPTIQHVCQTYN
ISVSFKQRSRMYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHH
LFMMGRNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVL
MFDMKEEIEVEPQFITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLG
LESSGVTVVSNPSTVSCPVGLSCPGLDILSSAGLGLTGLGLLGPTTLSINTSTTPNSLLN
ALNSSVSPLQSPSSGTPSPTLWATSLANTNTTGFSAIPHLMIPSTAQATLTSILLSGVPN
YGQNTPSPPPGLTPVEVHVNGMQSESKKGSPSLNGHVKASGIKYAALSATSLGENVLSTN
HSDGVRQTSAHGASEQVAAKANSEEGCNDAFVEVGMPRSPSHSANTSDLKQMMSSSKQAC
AKRQTVELLQGTKNSHLHTADRLLAEAELGAPESPVADKKAPGSERAAERAAAAQQNSER
ARLATQPSFVNMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKE
LRRANHVSYKPSMTTTYEGSSMSLSRSSSREHLGNGSESDNWRDRNGLGPTAHDFVSSIG
SPKRKQNKSAEHYLSSSNYMDCISSLTGSNGCNLNSLFKGSDLPELFSKLGLGKYTDVFQ
QQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFDPSNIRASFLEGGA
SGRLPRQYHSDIASVSGRW
NT seq 2940 nt   +upstreamnt  +downstreamnt
atggcggcgcagtgcgacccgctgagcgggtacctgcccccgccgctctccgacccgggc
tccaacagcgagcgcagcgccgactcgcccgcgcccggctccgaggaggactcggccggg
ccgccgcggcccctgcacagccccgagtggggcgaggagcgattccgggtggacaggaag
aaactggaggccatgctccaagctgctgcagagggcaaagggaaaagtggggaagacttt
tttcagaagattatggaagaaacaaacacacagattgcttggccatcaaaattgaagatc
ggagcaaaatcgaaaaaagatccccatattaaagtttctggaaaaaaagaaaacgttaaa
gaagcaaaagagaaaatcatgtctgtcttggacacaaaaagcaatcgggtaaccttgaag
atggatgtttcacatacagaacattctcatgtgataggtaaaggtggcaataatattaaa
aaagtgatggaggaaacgggatgccatatccattttccagactcaaataggaacaatcaa
gcagagaaaagcaatcaagtgtctattgcaggacagccagctggagtggagtctgcaaga
gtcagaattcgggagctgcttccattggtactcatgtttgaattgcctattgctggaatt
ctccaacccatcccagatcctaattctccaaccattcagcacgtttgtcagacatataac
atttcagtttccttcaaacaacgctctcgaatgtatggtgctacagtcattgtcagaggg
tcacaaaacaacaccagtgctgtgaaggagggaacagccatgctcttggaacacctggct
gggagcctggcctctgcaatccctgtgagcacacagctggacatcgcagcgcagcatcat
ctctttatgatgggccgaaacggcagcaacatcaaacatatcatgcagaggactggtgct
cagatccacttccctgaccctagtaacccacagaaaaaatccactgtctacctccagggc
acaattgagtctgtctgtcttgccaggcaatatctcatgggttgccttccccttgtgctc
atgtttgatatgaaggaagaaattgaagtagaaccacagtttataacacagctaatggag
cagttagatgtcttcataagcattaagcctaagccaaaacaaccaagcaagtctgtgatt
gtaaaaagtgttgaacgaaatgccttaaatatgtacgaggcacggaaatgtctcctggga
cttgaaagtagcggagtcaccgtagtatcaaatccctctactgtctcatgccctgttggt
ctgtcttgtcctggtttggatattttgtcctcagcaggactaggactcactgggcttggc
cttttaggtccaacaaccctgtcaatcaacacctcaactactccaaactctctgttgaat
gcccttaatagctctgtgagccctttgcagagtccaagttcaggcacgcccagtcccaca
ctgtgggcaacatctctggctaacacaaacaccacaggtttttctgctattccacaccta
atgataccatctactgcccaagcaaccttaactagtattctgctgtctggagtgcctaat
tatggtcaaaacactccatctccaccaccaggcttgactcctgttgaagtccacgttaat
ggcatgcaatcagaaagtaaaaaaggttcaccttctttaaatggccacgtaaaggcctca
ggtatcaagtatgctgcactgtctgccacatcgctgggagaaaacgtgttgagcacaaac
cacagtgatggagtaaggcaaacaagtgctcatggtgcctcagaacaagtagctgccaag
gcaaatagtgaagaaggttgcaatgatgcttttgtggaagtgggcatgcctcggagtccg
tcgcactcggcgaacaccagtgacctgaagcagatgatgagctcttccaagcaggcctgt
gccaagagacaaacagtggaattactgcagggcaccaaaaactcccacttacacacggcg
gacaggctgctggccgaggccgagctgggggcccccgagagccccgtggcggacaagaag
gccccgggcagcgagcgggcggccgagcgagcggctgctgcccagcagaactcggagaga
gcacggctggctacacagccctcctttgtaaatatgcaggcatttgactatgaacagaag
aaactactagcaaccaaagctatgttaaagaagccagttgtaacagaagtgagaactcca
acaaacacatggagtggtttggggttctctaaatcaatgcctgcagaaactatcaaggaa
ctaaggagagcgaatcatgtatcatacaagccttccatgacaactacatatgagggttca
tccatgtctctctcccggtccagcagtcgggagcacctgggaaatggcagtgaatctgat
aactggagagaccggaatgggcttggacccactgctcacgactttgtctcctcaattggc
agccccaaacggaaacaaaacaaatcagctgaacactatctcagtagcagtaactacatg
gactgcatttcctcgctgacaggaagcaatggctgtaacctcaacagtttgtttaaggga
tctgatctgcctgagctcttcagcaagcttggtttgggcaaatacacagatgtgttccag
cagcaagagattgatctgcagacattcctcactcttactgatcaagatttgaaagagttg
ggaattaccacttttggtgccagaagaaaaatgctgcttgcaatctcagaactgaacaaa
aaccgaagaaagctctttgacccgtcgaacatccgtgcctcgttcctggaaggcggagcc
agcgggcggctgccgcgccagtatcactcggacattgccagtgtcagcgggcgctggtag

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