KEGG   Taeniopygia guttata (zebra finch): 100225261
Entry
100225261         CDS       T01082                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100225261 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tgu01009]
    100225261 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgu03021]
    100225261 (ELL)
Protein phosphatases and associated proteins [BR:tgu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100225261 (ELL)
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100225261 (ELL)
    Little elongation complex (LEC)
     100225261 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL OrgC RNA12
Other DBs
NCBI-GeneID: 100225261
NCBI-ProteinID: XP_030112498
Ensembl: ENSTGUG00000001031
LinkDB
Position
28:3360001..3411654
AA seq 610 aa
MAALQAERGYGLSCGRLGRGTRVSVFHVKLTESALRAFESYQACKDAVTSKPVIQFQGSQ
GHIAIPRPDRPAEVRTFTFYLSNIGKDSPQGSFDCIQQYVSSNGNIHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQVRKPAPGASDAVPSRKRPT
PVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQ
QVANLSAKDSTFTLKDCVYKEVQKDWPGYSEGDQQLLKRILVRKLCQPQNSSAFQGEAPS
LSPPKDTLNSSSPPQKRPLPAEFIDPLANKKPRISHLAHRAQPTLNGKLNSSNGKDSLAP
PALPVPLPEPVGSSSSLPALELPRPHDPLADVSNDLAHNGRDCESTEPPERLSHPLPTDC
AQSSKHNCGSYVKSKKKSKKHKDKEKERKEKKSEEKCKEEKQNCEVIKNADLVSVPQEQV
PGLNGTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERIT
RRFTQLDAKLKQLLQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKK
LIAEYDQQQF
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcggcgctgcaggcggagcgcgggtacgggctgtcctgcggccgcctcggccgcggc
acccgcgtctccgtcttccacgtcaagctcacggagagcgccctgcgcgccttcgagagc
taccaggcctgtaaggatgctgtgacgtcaaaaccagtcatccagtttcaaggaagccaa
gggcacatcgccatcccgaggcccgatcgaccggcggaggtgcggaccttcaccttttat
ctctccaacattggcaaggacagcccccaggggagctttgactgcatccagcagtatgtg
tccagcaatggcaatatccatttggattgcctgggaagcatacaggataaaatcaccgtg
tgtgctactgatgattcctaccagaaggcgaggcagagcatggcacaggcagaggaggag
actcgcagccggagcgccatagtcattaaacctggggggagatatgtaggcaaaaaggtt
caggtgcgtaaacctgcaccaggagcttccgatgctgttccctccaggaagcgcccaacg
ccagtcaaccttgccagtgcaataaagagaggcaatagtgcgatttcccagagacccttc
aaagatagggttgtgcacttactggcactaaagccttataagaaacctgaacttattctc
agattgcagaaggatggactttctcagcaggacaaggatttgctggataaccttctgcaa
caggtggcaaatctgagtgccaaggacagcactttcacactgaaagattgtgtatacaaa
gaagtgcagaaggactggcctggctactcagaaggagatcagcagttgttgaaaaggatc
ctcgttaggaagctgtgccagccccagaacagcagcgctttccagggagaagctccttcc
ctgagccctccgaaggacaccctcaactccagctctccccctcagaagcgacccttacct
gcagagttcatcgaccccctggccaacaaaaagcccaggatctcgcatttggctcaccga
gcgcagcccactctgaacgggaagctgaattcctccaacgggaaggacagcctggccccc
cctgccctgcccgtgcctctgcccgagcccgtgggctccagctcctccctgccggccctg
gagctgccccggcctcacgaccccctcgccgatgtcagcaacgacctggctcacaacggc
agagactgtgagagcacggagcctcccgagagactgagccaccccctgcccacagactgt
gcccagagcagcaaacacaactgcggctcctacgtcaaatccaagaaaaaatccaaaaag
cacaaagacaaggagaaggagaggaaggagaagaagagtgaggagaagtgcaaagaggag
aagcagaactgtgaagtaataaaaaatgctgacttagttagtgttccccaggagcaggtc
ccaggtttaaatggaacatgcaataattctagtgtaccaacatcaacttcagaaatgcca
gattatttattaaaatacgcagccatttcctcctcggagcagcgtcagagctacaagaac
gacttcaacgcggagtacagcgagtaccgggacttgcacgcccggatagagcggataacc
cgacggttcacccagctggacgccaagctgaagcagcttctgcagggctctgaggagtac
aagaccatccacgatcaaattttacaggaatatcggaaaattaaaaagacaaaccccaat
tacagccaagagaagaaccgctgcgaatacctccacaacaaactggcccacatcaaaaaa
ctgatagcagagtatgaccagcagcagttttag

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