KEGG   Taeniopygia guttata (zebra finch): 100225263
Entry
100225263         CDS       T01082                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38A-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100225263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgu03041]
    100225263
Spliceosome [BR:tgu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    100225263
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    100225263
SSDB
Motif
Pfam: PRP38 PspB
Other DBs
NCBI-GeneID: 100225263
NCBI-ProteinID: XP_032607698
LinkDB
Position
1:12195665..12197279
AA seq 361 aa
MPAQVGQRRQSGCRAVRAAPGGSEGRCSAARQDRGRHQRSCSLCFGPGQRGPHGSGAGRA
EGAELGAAGRAMADRTVRDAHSIRGTNPQDLVEKIIRTRIYEYKYWKEEYFGLTAELVVA
KAMKLKCVGGIYGGNIKPTRFLCLMLKMLQIQPEKDFIVEFIKNKDFRYVQMLGALYRRL
TGTAIDCYKYLEPLYNDYRKIKSQNRNGEFELMHVNEFIDELLREERVCDIILPRLQKRY
VLEEAEQLEPRVSALEEVIDGIESSEGEEEEELEQIPSPDHCRRGYRDLDKPHRSLVVQY
XQSWSSSPRRRSRSRKGRSSSLHCKWYRSKILRSKSPGHHRSHRHRSHSKSPERSKKSHK
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgccggcccaagtggggcagcgccggcagagcggctgccgggctgtgagggcggctccg
ggcggctccgagggtcggtgctccgcggcgcggcaggaccgcgggcggcaccagagaagc
tgcagtttgtgctttggccccgggcagcgcggccctcacgggagcggggctgggagggct
gagggggctgagctcggagcggcgggcagagccatggccgaccgcacggtgagagatgcg
catagcatccgcggcaccaacccgcaggacctggtggagaagatcatccgcacacgtatc
tacgagtacaagtactggaaggaggagtattttggcctcacggccgagctggtggtggcc
aaggcaatgaagctgaagtgcgtgggaggcatctatggagggaacattaaacccactcgg
ttcttgtgcctgatgctgaagatgctgcagatccagcccgagaaggacttcattgtggag
ttcataaaaaacaaagacttcaggtatgtccaaatgcttggagcactgtacaggagactg
acaggcactgccatcgactgctacaagtacctggaaccgctgtacaatgactatcggaaa
attaaaagtcagaacagaaatggggaatttgagctgatgcacgtgaatgaatttatcgat
gaactactccgtgaggaacgtgtttgtgatatcatcctgcctcgactgcagaaacggtat
gttctggaagaagctgagcaacttgagcctcgtgttagtgctctggaagaagtcatagat
ggtatagaatctagtgagggggaggaagaagaagagctggaacagatcccgtctcctgac
cactgcagaaggggctacagggacctggacaagccccacagatctctggtggtgcagtac
tgacagagctggagcagttccccaaggaggcgcagccgctctcggaagggaagaagctca
tcactgcactgcaagtggtatcgcagcaagatactgagatctaaatctccagggcatcat
cgtagtcacagacacaggagtcattccaaatcacctgaaagatctaaaaaaagtcacaaa
aagtga

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