KEGG   Taeniopygia guttata (zebra finch): 100225307
Entry
100225307         CDS       T01082                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03030  DNA replication
tgu03410  Base excision repair
tgu03420  Nucleotide excision repair
tgu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100225307 (RFC3)
   03410 Base excision repair
    100225307 (RFC3)
   03420 Nucleotide excision repair
    100225307 (RFC3)
   03430 Mismatch repair
    100225307 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tgu03032]
    100225307 (RFC3)
   03036 Chromosome and associated proteins [BR:tgu03036]
    100225307 (RFC3)
   03400 DNA repair and recombination proteins [BR:tgu03400]
    100225307 (RFC3)
DNA replication proteins [BR:tgu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100225307 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    100225307 (RFC3)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100225307 (RFC3)
DNA repair and recombination proteins [BR:tgu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100225307 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    100225307 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_22 AAA_16 ABC_tran AAA_2 DUF2247 AAA_11 Sigma54_activ_2 ATPgrasp_ST
Other DBs
NCBI-GeneID: 100225307
NCBI-ProteinID: XP_002195786
Ensembl: ENSTGUG00000011814
UniProt: H0ZNJ8
LinkDB
Position
1:complement(64014724..64022918)
AA seq 356 aa
MSLWADKHRPGALARLDFHREQAARLRSLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSVSKIIGPIQSRCL
AIRVPAPSIEDICHVLSSVCKKEGLTLPQELAQRIAEKSGRNLRKALLMCESCRVQQYPF
SADQDIPEMDWEVYLRETANAIVGQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDDIMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctgtgggccgacaagcaccggcccggcgccctcgcccgcctcgacttccaccgc
gagcaggcggcgcggctccgcagcctggttcaatgtggtgactttcctcatctgttggtg
tatggcccatcaggagctggaaaaaagacaagaataatgtgtttgttaagggaattgtat
ggtgcaggagtggagaaactgaggattgagcatcagagtataacggcaccttctaagaag
aagattgaaattagcaccattgcaagtaattatcaccttgaagttaacccaagtgatgcg
ggaaacaatgaccgtgtggtaattcaggagctcttgaaaacagtggcacagtcccaacag
cttgagacaagtactcagcgagattttaaagtggtgctgttaacagaagttgacaaactt
actaaagacgctcagcatgctttgcgaagaacaatggagaagtacatggcgacctgccgg
ttgatcctgtgctgcaattcagtgtcaaaaattataggacccattcaaagcagatgcctg
gctatacgagtgcctgctcccagcattgaagatatctgccatgtcttgtccagtgtgtgt
aagaaagaaggcctgactcttcctcaggaactggctcaaaggattgcagagaaatctggc
aggaatcttcggaaagcactacttatgtgtgagtcctgcagagtacaacagtatcctttt
agtgctgatcaagacattcctgagatggactgggaagtttatttgagagaaactgcaaat
gctattgttggtcaacagacaccacaaaggcttttagaagtccgtggacgactttatgaa
ctcctgacccactgcattcctcctgagattataatgaagggtcttctgacagaacttcta
aataattgtgatggacaactgaaaggagaagttgcacagatggcagccttctatgagcac
cgcttgcaactgggcagcaaagccatttatcatctggaagcatttgttgcaaagtttatg
gcaatttacaagaagttcatggaggatgggctggatgacataatgttctaa

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