Taeniopygia guttata (zebra finch): 100225330
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Entry
100225330 CDS
T01082
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100225330 (RTTN)
Cilium and associated proteins [BR:
tgu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100225330 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
100225330
NCBI-ProteinID:
XP_030121780
Ensembl:
ENSTGUG00000009221
UniProt:
H0ZG13
LinkDB
All DBs
Position
2:96925387..97008081
Genome browser
AA seq
2230 aa
AA seq
DB search
MELSALVRKLGHELTEIRERSLKTILFKLDHNLISYADLVHEKALFHNLLEWFNFPVVPI
KEEVLNFVNSLIKHPPAAQKMVGIGAVEFFSQLRSDVDPNLQAIIDGIVDRLFFLSSELP
SSSSVCYQAQSQPSVDQPVLPQEELFTGYFCQSRSHLPQLEISPKRTVVKCLKFSTFPWL
TLTSTDRHILSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSLLSLLN
LAFGGEGRHQLALQAVSCLQQLCIFLRSRLNFHRDPSFSSSEQGTTSQNSSISYCQEGRG
APHSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRISLHSPFDIG
HIDLPDIENEDTLELQMKQLSLPQFCVSILENAIPLLRTGSRRMTMEVLELLVEDMSLIG
DAVSENVWEDDSLFALELKNKLLLVLGLLGETILYHKSNISAEQPKVMLVHHRMTFISIS
LFTVRLLQVLLPVEKASKVTQKSLLNALFLLSLDMSFSLEYPSIHESIAAYLEQMSTENY
SIYKQVSEAAYSIECTCNFMVEVHKEGDKNLSELLELADQALSSLPFHLHFPLLQECIHI
CSNIWKSAEANSLLQVEGQKLLLHLLSHPLLNIKAEAYHCCLEVVKDCLGIHNIAKPVPS
ISQGVHFLLHPKVLYEICTFGLQEDKNEVNSTAKSILIHLLQGRLMMEVLTWNKFTEALC
PVIPVLQGYADTKDTLGKCILSLSETTSDKGEGVLPAAPRLQAALRLLFSKKQLVRSVAA
KHLAFHVLNEEGANLKRPCLDSNVLSSISNLFIMEGAMELKLDDKMNSIIKAETVEKLYD
ILTSDAVDLVLRKSAAEQLVVILEDTKMHDIVKKLGVIEKILAYLNECVRVDGKLMESIV
VPCLTLLRKIVSADPEVRLSLAQQPSLLLLLFRVSLILQSDRAVLTETAVLLCLLLFDGI
ARTETWADGIASNNTEVPAFSLPVAVVRRYHLPVRITAHHVVSPNTVVVPLSSECLAMKP
VTDMLKMAWNLSWYHGIENLLHLINYEKETETFLDSLKLSSEDILILKITHTNYGLQDCL
SLIIQAASHRDVRTALTRLSFYVLNDRLALKCSSGPCGTILKNFVWQKAMNRFLQVLPAS
VEDEKLLVDVLRFFNKLLREQKSNLESDHLKWILKSLLKNQPKSLMGLLVRQDSQVQDEM
DETQAAVRQQLDKELIRLFNLLLVYSMSVTDRESLELAGLFRTELALKLLQCLRLTDAPH
FYGLPSLERTLQGMVHVTALPGWSTYSAAVEPVTICKKYLTGLLEVISSFYVEWGGNAMS
FMGKGVTKSTVLCLLHLSHEMMAQAKDMDWISLWSLPYDSGEEQVLSHLGLAWLVPLWVD
RDPEVRFTALGIGSALTSIEIGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAAF
ILQNLLVIPISTEDTKDCIWQGPCVHDEESGLSQTGIPALKALLYHCQFYEHVNQMVKRC
YLGCYMFDLNSYKEDKLSIEKGGTTDFDDSLNLWKAPPSQRKSSHSHSTSQTMILSASPS
LGSVAELQATVPSSASFIPETVVDRLTAQGQSDTTITESPSQHDSPMSAARSKQCAVVTP
ALLSAVCSLLHNLLVVMPKDTGIALQQTHLLTTLSSLVSANLVERCILELKAPLGHRCHI
ENVKAQVLLLLQYLSSVSRLLKSCLLVDSQLVSQDELLKPLLENTFRILTIHPKAGLDTE
LKSVLYETWVDSFSLLATLLWKNGQISFPSVTAALANHCTAIIDTISDCIHLSTTYPALY
VASLQFLSVLLNEEGRKQLQDKQSVCQNPTISFLLDHTEECQAPVTQLTALIIQVCERKS
SKDVLKEVATNALLSLLAVSKNAQKCALEADLIDSWIENMKHIHAQLNLDSLKPGKTQRK
KEDNLIKELRCSMQLLRNCLFQNEECKMAALKAHLVPVLHSLWPWLLADDSSMQIALHLL
CVYTANYPAGCASLCWASGGQSSLLSARSAAGNSLMHYILKLASHVSNDNSPVQQVVFCL
ISNLALSHDCRGIIQKSNFLQNFLSLSLPKGSNKNSGNVSTLWLKLLLNISFGEDGQQMV
MKINGFLDQIIEMCKYKHKSSQHLALLILHNICFSPANKPKILGNDQAIAVLSSCLESNS
PAVQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKSSPQPEENELHAYHVRC
LENIVQLLDC
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcggcgctcgtcaggaagctcggtcatgaactcacagagataagagagcga
tctttgaagactattctgtttaaactagaccacaacttgatttcctatgctgatctagtc
catgaaaaagcactttttcataaccttttggagtggttcaatttcccagtcgtgccaata
aaagaggaagtgttaaattttgtgaacagtttgatcaagcatccacctgctgcccagaaa
atggttggaattggtgcagttgaattcttctctcagcttcgctctgacgtggatccaaat
ttgcaggccataattgatgggattgtggatagactgttctttctttcttctgaactccct
tctagttcttcagtatgttatcaagctcagtctcaaccttcagtagatcagccagttctg
cctcaagaggaattattcactgggtatttttgtcaaagtagaagtcatctgccgcagtta
gaaatatctcccaaaagaacagttgtgaaatgcttgaaattttccacatttccttggcta
actctgacttcaacagatagacatattctttcatcaaatgaaagctctttgagaagtaac
aaccaaagtttaatttggagtacatgtgagcttcttcaggatgtgattatgcaagatttt
cctgcagagatcttccttcaaaggccaaagattgtacagagccttttgtctcttctaaac
ttggcttttggaggagaggggaggcaccagttggctttgcaggctgtgtcttgcttgcaa
cagctttgcatctttttgagaagtaggcttaacttccatagagatccaagtttttcttcc
tcagagcaaggcacaacttcccagaattcatctatatcttactgtcaagaaggaagaggt
gctcctcattctcagaatccatcacctggaagcagtagtcctcggccctctgttattggc
cggacagttcagcgtcctagaggagatggtcaagattgggatgcagtatcttccagtgga
aacagtactcaagcaaatgcaaactccagaatctctctgcattccccatttgacatagga
catattgacctaccagatattgaaaatgaggacactttggaattacagatgaagcagctt
agccttcctcagttctgtgtttccatcctggaaaatgcaatacctcttctaagaacaggc
agtaggagaatgacaatggaagttcttgaattgcttgttgaagacatgtctcttattggt
gatgctgtttctgaaaatgtttgggaagatgacagcctttttgcattggaattgaaaaac
aaattgcttctggtcttgggtttgcttggagaaactatattatatcacaaaagcaatata
agtgcagaacagcccaaggtgatgctggtgcatcacagaatgacatttattagcatttca
ctcttcactgttagattgctccaagtacttctccctgtagaaaaggcaagtaaagttaca
caaaagagtttgctgaatgctttgttccttctctcactggatatgtcattctccttggaa
tacccaagcatacatgaatccattgcagcctatctggagcagatgagtaccgagaactac
agtatttataagcaagtttcagaagctgcatattcaattgaatgcacttgtaactttatg
gttgaagttcataaggagggggacaagaatctttctgaattactagaattggcagatcag
gctttgagtagtctgcccttccacctacactttcccttgcttcaagaatgcattcacata
tgctcaaatatttggaagtctgccgaggccaactcactgcttcaggtggagggtcagaag
ttgcttctccatctattgtctcatcctttgttgaatataaaggctgaagcctatcactgc
tgtttggaagtggttaaggactgtctaggtattcataatattgcaaagcctgtgccttca
atctcccagggagtacatttccttctacaccctaaagtgttgtatgaaatctgtacattt
ggccttcaggaagataagaatgaggtgaactctacagccaagtccattctgatacatctg
ttgcaaggacggttaatgatggaagtattgacttggaacaagtttactgaggccctctgt
cctgttattcctgttttacagggttatgctgacacaaaagatactttaggtaaatgcatc
ctctctttgagtgaaacaacctctgacaaaggagagggtgttctcccggcagctcccagg
ctacaggctgctctgcgccttctcttctcaaaaaagcagctggttcgttctgtagcagct
aaacatttagcattccatgttctcaatgaagaaggggcaaacctgaaacgcccatgcctg
gatagtaatgtcctttccagcatttcaaacttatttattatggagggagctatggagcta
aaattggatgataaaatgaactcaataattaaggcagaaactgttgaaaagctgtatgat
attttgacttctgatgctgttgacctagttttacggaagtctgcagctgagcagctggtt
gtcattttagaagataccaaaatgcatgacattgtgaaaaagttaggtgtgatagagaag
atattggcctaccttaatgagtgtgtacgtgtggatggcaagcttatggaatctatagtg
gtaccgtgtctgacgcttctacgcaaaattgtgtctgctgacccagaagttcgcctgtcc
ctggcacagcaaccttctctactgcttttgctattcagagtttccctgatactccaaagt
gatcgtgctgttttaactgaaactgcagtattgctttgtcttctgttgtttgatggaata
gcaagaacagaaacatgggctgatggtatagccagtaataatactgaggtacctgccttc
agtttacctgttgctgttgttagaaggtatcatctcccagtcaggatcactgctcatcat
gtagttagccctaatactgttgtggtgccactgtcttctgagtgcttggctatgaaaccc
gtgacagatatgcttaagatggcttggaatctgtcatggtaccatgggattgaaaaccta
ctgcatctgataaattatgagaaggaaacagaaacatttttagactctctaaaactttcc
tcagaagacattcttatattgaaaataactcacacaaactatggactgcaggattgcctt
agtttgatcattcaggcagcatcccacagggatgttagaactgctctcactaggcttagc
ttctatgtcctgaatgacagacttgcattaaaatgcagttctggtccttgtggaaccatt
ttgaaaaactttgtttggcagaaagcaatgaacagatttctacaagtgcttccagcttct
gtggaggatgaaaagcttttggtagatgtcctaagattttttaacaaattgcttagagag
cagaaatcaaatctggaatcagaccatctaaagtggatcttgaaatcattgcttaaaaat
cagccaaaatcccttatgggccttctggtacgacaagattcccaagtgcaggatgaaatg
gatgaaacacaggctgctgtcaggcaacaactggataaagaactcattcgtctttttaac
ctgttgttagtttattctatgtcagtgactgacagagagagcttggaacttgctggcttg
ttcagaacagagctggctctgaagctgcttcagtgcttaaggctaacagatgcaccacat
ttttatgggcttccatcactggagagaacattacaaggaatggttcatgttactgcgctt
ccaggctggagtacctattctgctgcagttgaacctgtcacaatttgtaagaaatattta
acaggtcttcttgaggtcatctcatcattttatgttgagtgggggggaaatgccatgtcc
ttcatgggaaaaggtgtgacaaaaagcacagtcctttgcttgcttcacttatctcacgaa
atgatggctcaagccaaggatatggactggatatctctttggtctttgccatatgatagt
ggtgaagaacaagttctgtctcatctaggtctggcatggctggttcctttatgggtagat
agagatcctgaggtcagatttacagcacttggaataggatcagctcttacatctattgaa
ataggatgcattgctttagcagaaagctgccagaatatttcaggaggcctttggggaaca
gtgataaacatccttctggatcaatctgaatgtagcatggtacgcagagaggctgctttt
attctacaaaatctgcttgtgattccaatctcaacagaagacactaaagattgtatttgg
caaggtccttgtgtgcatgatgaagaatctggcctctctcagacaggaatacctgctctt
aaagcccttttgtatcactgtcagttctatgaacatgtgaatcagatggtgaaacgctgt
tacctaggatgttacatgttcgatttgaattcttacaaggaagacaagctcagcatagaa
aaaggtggtacgactgattttgatgattctctcaatctttggaaggctccacctagtcag
agaaaatcttcacattctcactcaacatctcaaactatgattctgtctgcatcaccatca
ctgggaagtgttgctgagcttcaggcaacagttccaagttcagccagttttattccggaa
actgtggttgatcggcttacggcacaaggtcaaagtgatacaaccataacagaatctcca
agtcaacatgattctcctatgtctgctgctcggtctaaacagtgtgctgtagtcacacct
gcccttttgtcagctgtttgcagccttctgcacaatctgctggttgtgatgccaaaagat
actggaattgcccttcaacaaacacatttgctaacaactctcagcagtcttgtaagtgct
aatctggttgaaagatgcatcttggaactgaaagctccattgggtcatcgatgtcatata
gaaaatgtaaaagctcaggtcttgttattacttcagtacttgtcatctgtgtccaggctt
ctaaaatcatgtttattggtggactctcagcttgtaagccaggatgaactgctgaaacct
ctgttagagaataccttcaggattctcaccatacatcccaaagctggcttagataccgag
ttaaaatctgtactttatgaaacttgggtcgactctttcagccttctagctacattactg
tggaaaaatggccagatatcttttccatctgtgacagcagcccttgcaaatcactgtaca
gcaataattgataccatttctgattgtattcatctgtctaccacatatcctgctttatat
gtggctagtttacagttcctctctgtccttttgaatgaggaaggaagaaaacagctccag
gataaacagagtgtatgtcaaaatccaactattagctttcttctggaccacactgaagaa
tgccaggcaccagtaactcaacttactgctttaattattcaggtctgtgaacgaaaatct
tcaaaggatgtgctgaaagaagttgctacaaatgcactgttgtctctattagctgtcagt
aaaaatgcccagaaatgtgctttggaagctgacctgatagacagctggatagaaaacatg
aagcacattcacgcacagctgaatttggattccctaaaacctgggaaaacacagagaaaa
aaggaggataacctcatcaaggagttaaggtgttctatgcagctccttagaaactgcctc
tttcaaaatgaagaatgcaaaatggcagcactgaaagctcatcttgttcctgttctgcat
tctctgtggccctggttgttagcagatgactcctcaatgcaaatagctctgcatttgctt
tgtgtctacactgcaaactatcctgcaggttgtgcttcactttgttgggccagtggtgga
caatcatcacttctatctgcacgaagtgcagctggcaattcattaatgcattacatcttg
aaattggcttcccatgtgtcaaatgataacagcccagttcagcaggtggtcttttgtcta
atatcgaatcttgctctttctcatgactgtagaggcattattcagaagagtaacttcctg
cagaactttttatctctttcattgccaaaaggaagtaataaaaattctggtaatgtgtct
actctctggcttaagctgctactgaacatatcttttggagaagatggacaacagatggtt
atgaagataaatggctttttagaccagatcattgaaatgtgtaaatacaagcacaagagc
agccaacatctagcacttcttattctacataacatatgttttagtccagctaataaacca
aagatattaggtaatgatcaagcaattgcagtactgtcttcctgtttggaaagtaacagt
cctgctgttcagagaataggagcagcttcgctttgggctttgcttcacaactatcagaag
gcaaaagtaactttgaagaatccatctataaggagaagaatagatgaagcttattcttta
gtgaagaaaagttctccccagccagaagaaaatgaactacatgcctaccatgtaagatgc
ttagagaatatagtgcagcttcttgattgttaa
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integrated database retrieval system
