Taeniopygia guttata (zebra finch): 100225471
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Entry
100225471 CDS
T01082
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100225471
03036 Chromosome and associated proteins [BR:
tgu03036
]
100225471
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100225471
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
Pre-60S particles
Helicases
100225471
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100225471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
100225471
NCBI-ProteinID:
XP_032604917
LinkDB
All DBs
Position
6:1600332..1611291
Genome browser
AA seq
697 aa
AA seq
DB search
MPAAEPEHSPAEPQAPAAAEALRRGRRRKGKQEETPGKKVKQQVKAKRRGKAELEQAQPE
ESGLGDGDFQPPVPKKTKKVQEKSSGLVGESDASQQAVESASAVSSGVASPAAREQDSDA
EELTEEAKEGAFSNFPLSQNTVRLLTARGIKYLFPVQVKTFQPIYDGKDVIAQARTGTGK
TFSFALPLIEKLQSVTQDGRRGRAPKVLVLVPTRELATQVAKDFKNLTKKLSVACFYGGS
PYKEQLDLLKSGIDILVGTPGRIQDHIQNSKLELSSVKHVVLDEVDHMLDMGFAEQVEEI
LGSSYKRGSENNPQTLLFSATCPRWVYDVAKKYMRDEYEQIDLIGKKAQRTATTVEHLAI
QCRSSQRAGVLGDIIQVYSGSRGRTIVFCETKKEANELAMNASLKQDAQSLHGDIPQKQR
EITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGI
CICLFQRREEDLLKQVEHKAGITFKRVGVPSATDVIKASSSDAKKLLEAVPPAAVDYFRK
SAEELIDEKGAVAALAAALAHISGAAHIQQRSLLNSTAGFVTMVLKCSIEMHNMRYAWRG
LKEQLGEEVDNKVSAMRFLKGKMGVCFDIPVDELSNIQEQWRDTRRWQLSVASELPELEE
YPQEGGRGFSRFGNSRQGDFKRNSWFKSGNRGLQQST
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccgagcccgagcacagccccgccgagccccaggcgcccgccgccgcggag
gcgctgcgccgcggccgccggaggaagggcaagcaggaggagacgccggggaagaaggtg
aagcagcaggtgaaggcgaagcggcgcggtaaggccgagctcgagcaggcgcagcccgag
gagagcgggctgggggacggcgacttccagccccccgtgcccaagaagacgaaaaaagtc
caggagaagagcagcggtttggtaggagagagcgacgcgtcccagcaggcggtggaatct
gcctccgctgtgagcagcggcgtggcatccccggctgcccgagagcaggacagcgacgcc
gaggagctgacagaagaagcaaaagaaggcgccttctctaattttcctctctcacaaaac
actgtcagacttctcacagctcgaggtataaaatacctgttccctgtgcaagtgaagact
ttccagcccatatatgatggcaaagatgtaattgcacaagctcgaacaggaactgggaaa
accttttcctttgctcttccactgattgaaaagcttcagagtgtcacccaggatgggaga
agaggccgtgcaccaaaagtgctggttcttgttccaaccagggaactggccactcaggta
gccaaagacttcaagaatctcacaaagaaactgtcagttgcttgtttttatggaggaagt
ccatacaaagaacagcttgatctccttaaaagtggcatcgatattctggtgggaactcct
ggccggatccaagaccacattcagaacagcaagctggaactttccagtgtgaagcatgtt
gttttggatgaagtggatcatatgttggacatgggctttgctgaacaagtggaagaaatc
ttgggatcgtcctacaagagaggctccgagaacaacccgcagacgctgctgttttctgca
acttgtccacgatgggtttatgatgtagcgaaaaaatacatgagagatgagtatgaacag
attgacctgattggaaagaaggctcaaaggacagccacaactgtggaacacttggccata
cagtgtcgctcatctcagagggcaggagttcttggggacatcatccaggtctacagtggc
agccgtgggcggaccattgtcttttgtgagaccaaaaaggaagcaaatgagttggctatg
aatgcttctctcaaacaggatgcccagtccttgcatggggacattccacagaaacagaga
gaaatcacattaaaaggcttcagaaatggtgtgtttgaagtgctgattgcaacaaatgta
gctgcccgtggtttggatattcctgaggttgaccttgttatacagtgctcaccaccaaaa
gatgtggattcctacatccaccgttctggacgcacgggccgagcgggccggactggcatc
tgcatatgtttgtttcagagaagagaagaagatcttctgaagcaagtcgagcacaaagcg
ggtattacctttaagcgtgtaggcgttccctctgctacagatgtaattaaagcttcaagt
agtgatgccaaaaagttgctggaggccgttcctcccgctgcagtggactacttcagaaaa
tcagctgaggagctgatagatgagaagggggcagtggctgccctggctgcagccctggca
cacatttctggggcagctcacatccagcagcgctccctgctcaactcaacagctggcttt
gtgaccatggtgttgaagtgttcaatagagatgcataacatgcgctatgcctggcggggg
ctgaaggagcagcttggggaggaggtcgataacaaagtgtctgcaatgcgtttcctcaag
gggaagatgggcgtgtgctttgatatccctgttgatgaactaagtaatatacaggagcag
tggagggacacacggcgctggcagctgtcggtggccagtgagctgcctgagctggaggag
tatccacaggaggggggacgaggcttctccaggtttggcaacagcaggcaaggagacttc
aagagaaacagctggttcaagagtggaaatcgaggacttcaacagagcacttga
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