Taeniopygia guttata (zebra finch): 100225572
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Entry
100225572 CDS
T01082
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100225572 (RNF13)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100225572 (RNF13)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100225572 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Neur_chan_memb
DUF7027
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100225572
NCBI-ProteinID:
XP_030136226
Ensembl:
ENSTGUG00000011407
LinkDB
All DBs
Position
9:complement(25329118..25350103)
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AA seq
381 aa
AA seq
DB search
MLLSIGMLMLSATQIYTIVTVQLFAFLNLLPVEADILAYNLENGTRTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIAPPPLRDNSSGAFIVLIRRLECNFDVKVLNAQRAGYKAAI
VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGETSANSLKEEFTYEKGGHIVLIPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQ
EENEVSENTPLLRPLASVSTQSFGALSESHSHQNMTESSEYEEDDNDNVDSSDAENGMNE
ESVVVQLQPSEDREYRVANTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgtcaataggaatgctgatgttgtctgccactcagatatacactattgtgact
gtgcagttgtttgccttcctgaatcttttacctgtggaggcagatattttagcatataac
cttgaaaatggaacccggacatttgatgatctacctgcaagatttggctacagactgcca
gcagaaggcttgaagggatttctaataaattccaaacctgagaatgcatgtgaacctata
gccccacctccactgagagacaactcctctggtgcttttattgtgttaatccgaaggctg
gagtgcaactttgatgtcaaggtcttaaatgcccagagagctggatacaaggcagctata
gttcacaatgtcgattctgatgacctcataagcatgggatccaacgacattgaggtttta
aagaagattgacattccttctgtctttattggtgagacatctgctaattctcttaaagag
gagtttacttacgaaaaaggtggccacattgtgttaatcccagagttcagtcttccgttg
gagtactacttaatccctttcctaataatagtagggatctgtcttattctcatcgtcata
tttatgataacaaagtttgttcaggacagacacagagcaagaaggaatcgccttaggaag
gatcagcttaagaaacttcctgtacataagtttaagaaaggagatgaatatgatgtgtgt
gccatctgtctggatgaatatgaggatggagacaagctcaggatccttccatgctctcat
gcatatcactgcaagtgtgtggacccgtggctgacaaaaacaaaaaaaacctgtcctgtg
tgtaagcagaaagtggtcccttcccagggggactctgactcggagacagacagcagccag
gaggagaacgaagtgtctgagaacactcctctgctcaggcctttggcctcggtcagcacg
cagtccttcggggctctgtcagagtcgcattcccatcaaaacatgaccgagtcctcggag
tacgaggaggatgacaatgacaatgttgatagcagtgatgcggaaaatgggatgaatgaa
gaaagtgtagtggtccagctgcagcccagtgaggacagggagtacagagtggcaaacact
gtctga
DBGET
integrated database retrieval system
