Taeniopygia guttata (zebra finch): 100225644
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Entry
100225644 CDS
T01082
Symbol
CUL4A
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03420
Nucleotide excision repair
tgu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100225644 (CUL4A)
09124 Replication and repair
03420 Nucleotide excision repair
100225644 (CUL4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100225644 (CUL4A)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100225644 (CUL4A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100225644 (CUL4A)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
100225644 (CUL4A)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100225644 (CUL4A)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100225644 (CUL4A)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100225644 (CUL4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ADH_zinc_N
Motif
Other DBs
NCBI-GeneID:
100225644
NCBI-ProteinID:
XP_030135562
LinkDB
All DBs
Position
1:complement(88639215..88677195)
Genome browser
AA seq
763 aa
AA seq
DB search
MADEPQKKSHLSALVGHTNGLTKPASLTASRSAGGGGGGATASSKKLVIKNFRERPKLPD
NYTQDTWQKLNEAVGAIQSSISIKYNLEELYQAVENLCSYKVSATLYKQLRQVCEEHVKA
QILQFREDSLDSLLFLKKINKCWQDHCRQMIMIRSIFLFLDRTYVLQNSVLPSIWDMGLE
LFRNHIISDKQVQTKTIDGILLLIERERNGEAVDRSLLRSLLSMLSDLQVYKESFEQRFL
EETNCLYAAEGQRLMQEREVPEYLHHVNKRLEEEGDRVITYLDHSTQKPLIACVEKQLLG
EHLSAILQKGLDSLLDENRISDLTQTYQLFSRVKGGQQILLQHWSEYIKNFGTTIVVNPE
KDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMKESFETFINKRPNKPAELIAKYVDSK
LRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSML
SKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQYMQNQSDPGNIDLTVNILTMGYWPTY
TPMEVHLNSEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQT
LVLLMFNEGDEFSLEEIKMATGVEDSELRRTLQSLACGKARVLIKNPKGKDVEDGDKFIF
NGDFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLV
SELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagccgcagaagaagtcgcacttgtcggccttggtgggacacacgaacggg
ctcaccaagcccgcctcgctgaccgccagccgctctgcgggagggggaggaggaggcgcg
accgcctcctccaagaaactcgtgatcaagaacttcagagaaagacccaaattacccgat
aattatactcaggacacctggcagaaacttaatgaagcggtgggagccatacagagtagt
atttctattaaatacaaccttgaagagctctaccaggctgttgaaaatctctgttcctac
aaagtctctgctacactgtacaaacaactgcgacaagtctgtgaagaacatgtgaaagca
caaatccttcagtttagagaagattctctggatagtcttttatttttaaagaagataaat
aaatgctggcaagatcattgcagacaaatgatcatgatcagaagcattttcttatttttg
gatcgtacatatgtgcttcagaattcagtgcttccttctatatgggatatggggctagag
ttgtttagaaaccatataattagtgacaagcaagttcaaaccaagactattgatggaatt
ctcctgctgatcgaacgagagcgaaatggtgaagctgtggacagaagcttgctgcggagt
ttgttgagcatgctctcggatctgcaggtttacaaggaatcatttgaacagaggttccta
gaagagacaaattgtttatatgctgcagaaggccaaagattaatgcaggaaagagaggtc
ccagaatatcttcaccatgttaataaacgtttggaagaagaaggagacagagttataaca
tatttagatcacagcacacagaaaccactgattgcttgtgtggagaagcagctactagga
gaacacttatcagctattttgcaaaaaggacttgatagcctgctcgatgaaaatagaata
tcagatttgacccagacataccagctgttcagccgggtaaaaggtgggcagcagatcctt
ttgcaacattggagcgaatacatcaagaactttgggacaacaatagtggttaatcctgaa
aaagacaaggatatggtgcaagagctactagattttaaggataaagtggaccatatcata
gaagtgtgctttcagaaaaatgaaaaatttataaacttgatgaaggagtcctttgaaaca
tttatcaacaagagaccaaataagcctgcagaattgatagcaaaatatgtggattccaag
ttaagagctggtaataaagaagcaacagatgaagagttggaaagaatccttgacaaaata
atgatcatatttagattcattcatgggaaagatgtgtttgaggcattttataagaaggac
ttggccaaaagactgctggttggaaaaagtgcatcagtagatgctgagaagtccatgtta
tcaaagcttaaacatgaatgtggtgctgcttttaccagcaaactggagggcatgttcaaa
gacatggaactgtccaaagatatcatggtacagtttaagcagtatatgcagaaccaaagt
gacccaggaaatatagacttgacagtaaatatattaactatgggatattggccaacttat
acacctatggaagtccacttaaattcagagatgataaagcttcaagaggtatttaaaacc
ttttaccttggcaaacacagtggtcgaaaacttcaatggcaaaccactttaggacatgct
gtcctaaaggcagaatttaaggaagggaagaaggagtttcaagtatcactctttcagaca
ttagtattgcttatgtttaatgaaggagatgaattcagtttggaagaaattaaaatggct
actggtgtagaggacagtgaattaagaagaacgttgcagtctttagcttgtggaaaagca
cgagtattgatcaaaaatccaaagggcaaggatgtagaagatggagataaattcatcttt
aatggagatttcaagcataaattgtttagaataaagatcaaccagattcaaatgaaagaa
acagttgaagaacaggtcagcacaactgaaagagtatttcaggacaggcaatatcagatt
gatgctgctattgtacgaataatgaagatgaggaagactcttggtcataatcttcttgtt
tctgaattgtataatcaactgaaatttcctgtaaagcctggagacttgaaaaagagaatt
gaatctctcattgacagagactatatggagagagacaaagacaaccccaatcagtaccac
tatgttgcataa
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