Taeniopygia guttata (zebra finch): 100225684
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Entry
100225684 CDS
T01082
Symbol
SORCS2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100225684 (SORCS2)
Membrane trafficking [BR:
tgu04131
]
Protein recycling
Others
Others
100225684 (SORCS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
100225684
NCBI-ProteinID:
XP_030126542
Ensembl:
ENSTGUG00000010129
LinkDB
All DBs
Position
4:complement(10856150..11388559)
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AA seq
1146 aa
AA seq
DB search
MAHGGPRVSAAAAPRGAARLPPPLLLLLLLLLLPPLLGAAAAPRCAEPCGRPRPVALTLG
ARSPPEPRRGGGAAAGSSRSRRASLAAGREQVSLISTSFVLKGDASHNQAMVHWTGENSS
VILILTKYYHTDMGKVLESSLWRSSDFGTLYTKLNLQPGIATVIDNFYICSTNKKKIILV
SSSHNDRDQSLFISTDEGATFQKQPIAFFVETLLFHPKEEDKVLAYTKEGKIYVSIDLGK
KWNLLQERVSKDHFFWAVAGVDGDLDLVHMEIQDLSGGYRYITCQIQNCSDKTMTVPFAG
STDRDSLTVQDDYIFLQTTSANRTKYYVSYRRNGFVQMKLPKYALPKDLQIISTDENQVF
VAVQEWYQTDTYNLYQSDPQGVYYSILLENVRSTKQPEENVLIDILEVRGVKGVFLANQK
IDGKVMTLITYNKGRDWDFLNPPDVDMNGKPTNCKPPDCHLHLHLRWADNPYVSGTVHTK
DTAPGLIMGAGNLGSQLVEYKEEMYITSDCGNTWRQVFEEEHHILYLDHGGVIVAIKDTS
IPLKILKFSIDEGQTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVD
FRPSFPRECTDEDYESWELTNLQGDRCIMGQQRSFRKRKISSWCIKGKSFTSALTSKVCE
CVNTDFLCDYGFERSAPLKLESSKCFADFWFNPEAPPEDCVLGQAYTSSTGYRKVVSNVC
EGGVDLQQNLAHHMCPLIAPKGLQISIREESLAVRPGEDITFIVQQEQGDVLSTKYQVDL
GDGFKAIYVNLTMTGEPIRHRYENPGIYRVSVKAENVAGHDEAVVFVQVSSPLQALNLEV
VPVIGRNQEVNLTAIILPKNPNLTVFYWWIGNNLQPLLTLESFLVTKFAETGDVRVTVQV
SCGSSMLQDSKVVHVFDHFHVLPLKFTKDLDMYNPDIPEWREDIGRVVTRLLAKETSIPE
ETLMTVVKPGLPTAADLHVLLPANQPKKKRSITSDKRIAAIKQALNAHNISFFLRGGYWV
LVTLADSGSDSQRIGGGSGYWAIVVLFVICLVAVGAFILYKFKRKLPGRNVYAQMHNEKE
QEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLVTPSGRSGNLNSYRVPLLLMPVSVQSQA
ITQAWF
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacggcgggccacgcgtgtccgccgctgccgctccgcgcggggctgcccggctg
ccgccgccgctgctgctgctgctgctgctgctgctgctgccgccgctgctgggcgccgcc
gccgctccgcgctgcgcggagccctgcggccgcccgcgccctgtagccctgaccctcggg
gcgcgcagcccgccggagccgcggcgcggcggcggggcggcggcggggagcagccgctcc
aggagagcatccttggcggccggccgggagcaggtctccctcatcagcacctccttcgtg
ctgaaaggggacgcgtctcacaaccaggcgatggtgcactggacgggcgagaacagcagc
gtgatcctgatccttaccaagtattatcatactgatatggggaaagttctggagagctct
ttgtggaggtcttcagattttgggacattatacacaaagttgaatctacagcctgggatt
gccactgttattgacaatttctacatttgttccaccaacaaaaagaagataattcttgta
agttcttcccataatgaccgtgaccaaagccttttcataagcacagatgaaggagccact
ttccagaaacaacccattgctttctttgtggaaaccctcctttttcacccaaaagaagaa
gataaagtacttgcttataccaaggaaggcaagatttatgtatctattgacttgggaaaa
aaatggaaccttctgcaggaacgagtttctaaagatcattttttttgggctgttgctgga
gttgacggggaccttgatttagttcatatggaaatccaggacctcagtggaggttatcgc
tacatcacttgccagattcaaaattgttctgataagacaatgacagtcccatttgctggc
agcactgatcgggattccctgactgtgcaggatgactacatatttcttcagacaacatca
gcaaatcggaccaagtattacgtgtcctaccgtcggaatggctttgtacagatgaagttg
ccaaaatatgcattgccaaaagacttacagataatcagtacagatgaaaaccaggtgttt
gtggctgtacaggagtggtaccagacagacacatacaacctgtaccagtctgacccacaa
ggtgtttactactccatcttgctggagaatgtccggagcacaaagcagccagaagagaat
gtcctgatagatattctggaggtcagaggtgtaaaaggagtctttttggccaaccagaaa
attgatgggaaagtcatgactctgataacctacaacaaaggccgtgactgggattttcta
aaccctccagacgtcgatatgaatggcaaacccaccaactgcaagcctcctgattgtcac
ctccacctccatctgcggtgggcagacaatccctacgtgtcaggcacagtgcacaccaag
gacactgcaccagggctcatcatgggggcaggtaacctggggtcccagctggttgagtat
aaagaagagatgtacataacatctgactgtgggaacacgtggcgtcaggtctttgaagaa
gagcaccacatcttgtacttggaccatggtggagttattgtggctatcaaagacacttct
atccctctgaaaatactcaagttcagcatagatgaaggccagacgtggagcacacataat
tttaccagcacttctgtctttgtagatggactacttagtgaacctggagatgagacactg
gtcatgacagtctttggacatatcagctaccgttcagactgggagctggtgaaggtggac
ttcagaccatccttccccagggagtgcactgatgaagactatgagtcttgggagctcaca
aatctgcagggtgatcgttgcatcatgggccagcagagaagctttcgtaagaggaagatt
tcatcatggtgcattaaagggaaaagtttcacatcagctctcacatccaaagtttgtgaa
tgtgtgaacactgatttcttatgtgattatgggtttgagcgctctgcgcctctgaagttg
gagtcgagcaaatgctttgctgacttttggtttaacccagaagcacctcctgaagactgt
gtgttggggcaggcatacaccagcagcactgggtacaggaaagttgtttctaatgtgtgt
gaaggtggagtagacctgcagcagaacttggcacaccatatgtgtccactgattgctccc
aagggacttcagatcagcatcagagaagaaagtctggctgttaggcctggggaagacatc
accttcattgtccaacaagagcagggtgatgtattgagtaccaaataccaggtagatctt
ggagacggctttaaggcaatatacgtgaacctgacgatgaccggagagcccatccgtcac
cgctacgagaatcctgggatttaccgcgtgtcggtgaaggctgagaacgtggctgggcac
gatgaggccgtggtcttcgtccaagtcagctctccacttcaggctctaaatttagaagtg
gttccagttattgggagaaaccaggaggtgaacctgacagccatcattctgcccaagaac
cctaatttgacagttttctactggtggataggaaacaatcttcagccactgcttacattg
gagagttttctggtgacaaagtttgctgagacaggtgatgtcagagttacagtgcaagtt
tcctgtgggagctctatgcttcaggactcaaaagttgtccatgtttttgatcattttcat
gttcttcctctgaagtttactaaggacctggacatgtacaaccccgacataccggagtgg
agggaagacattgggcgggtggtgacgcgacttcttgcaaaggagaccagtatacctgaa
gaaacactcatgacagttgtgaaacctggtctacccacagctgctgacttgcatgtgcta
ctaccagcaaatcaaccaaaaaagaagagaagcataacaagtgataagagaatagcagct
ataaagcaggccctgaatgcacacaacatcagtttcttcctgaggggaggatactgggtc
ttagtgactttagctgactccggttcagactctcagaggattggaggaggcagtggctac
tgggctattgtggttctctttgttatttgtctagttgcagtcggggctttcatcctctac
aaattcaaaaggaaactgccaggcagaaatgtctacgctcagatgcacaatgaaaaagag
caggagatgacaagccctgttaatcacagtgaggacacccagaacatcatccagggtgag
gagtttattgatgatgatctggactctcaaacactagtgactccttctgggagaagtggc
aacttgaacagctacagagttcccttattgctgatgccggtcagtgtccagtcccaggca
atcactcaggcgtggttttga
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