Taeniopygia guttata (zebra finch): 100225711
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Entry
100225711 CDS
T01082
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100225711 (MMS19)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100225711 (MMS19)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100225711 (MMS19)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100225711 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
100225711
NCBI-ProteinID:
XP_030132080
Ensembl:
ENSTGUG00000009642
LinkDB
All DBs
Position
6:21067463..21082578
Genome browser
AA seq
1042 aa
AA seq
DB search
MAAAGPGPGAEVQALAASVRDFVSGQQDGRAAEVAAGVKDGRWTVLQLVEALGFCLENTD
PRMRGQGIQLLSQVLLQCYSLLQEKEVLHLVMFYESRLQDNHLVIPSVLQGLRALSMCEV
LSPGLAVSVLKAIFQEVHVQSLPQLDRHTVYSIITNFMSTREEELKGLGANFTFGFIQVM
DGEKDPRNLLVAFQIVRDLIAKDYALGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDL
ILSLRAVLASTTQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLPSL
WSSLRREVFQTASEKIETECLAALRALSACLSRSVLSSDSEDLLDSFLSSILQASFLSSP
HSNFWLLQDCRHHLCEPDMKLVWPSAKLLQAAAGASLRTYHCITHSVLPLLLEQYTKHTQ
SSQRRTILEMLLGFLELQQKWGNVEEGEDENALLLLQAQICSVVFSALLDPSVQLQLVGI
KALTVLGSLQGFLSSSNLELVADHLIRLALHEDSQSSEAAMEAAGSLAPTFPKVFSGHMV
PRLKEELQSEREENYHNRHSLQQRCLQALAAVSTHTSIVRETVPILLQHLQKVQKGTEAR
NTQDMISVCQSLHRVALQCQQDAEGCWYFHQTVVPCLLAMAVQAAMPESTHTLPGKALLE
EEVLAAMIPVISAATTHLRPELAAQSVSHVVPLFLDGDVSFLPQNSFPCSFQPFGDGEFL
EAQRRLVALLMAFICSLPRDVAIPQQEWLLRELLALSCSCNCPFTATTAAKCFAGLVNKH
PAGQQLDEILQLAVNRMEPSLAEGPRRTQALTLLLWVTKALVLRYHPLSSCLTDKLLGLL
GDTELGPATADGFSLLMAESPDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVK
ANYLKGLSHVLNHLPKPVLVTELPTLLSLLLEALSCSDRVVQLSTLSCLHPLLLEAPQIM
SLHVDTLVTKFLNLTSSPTMAVRIAALRCAHALTSLPTTVLLPYKGRVIRALAKPLDDKK
RLVRKEAVAARGEWFLLGSPGR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgggcccgggcccggggcggaggttcaggctctcgccgcctccgtccgg
gacttcgtgtccgggcagcaggacggccgtgccgcggaggtggcggcaggggtgaaagat
ggaaggtggacagtgctgcagcttgtggaagccctggggttttgcctggagaacacagat
cctcggatgcgagggcaaggcatccagctgttgtcacaagtcctgctccagtgttactcc
ctgcttcaggagaaggaagtgctgcatctggtcatgttctatgagagccggctgcaagat
aatcacctggtgatcccctcggtgctccagggactccgggcactgagcatgtgtgaggtg
ctgtccccagggctagcagtgtctgtgctcaaagccatcttccaggaggtacatgtgcag
tcattgccgcaactggaccgccacacagtctacagcatcatcaccaacttcatgagcacc
agggaggaagagctgaaaggcctgggtgccaacttcaccttcggcttcatccaggtcatg
gatggggagaaggatccccgcaatctgcttgtggccttccagattgtgcgtgatctcatt
gccaaggactatgccctgggtccctttgtggaggagctctttgaagttacatcctgctac
ttccctgttgattttactccaccccccaatgatcctcacggcatccagagagaagacctg
atcctgagcctccgggctgtactggcttccacaacccagtttgctgagttccttctccct
ctgcttattgagaagttggactcagaactgcaaagtgccaagcttgactcgctgcagact
ctgactgcctgctgtgccatctatgggcagaaggagctgcaggaattccttcccagcctc
tggtcatccctgcgcagagaggtgttccagacagcgagcgagaagattgagacggaatgc
ctggctgcactgcgtgctctctctgcctgcctctcccgctccgtgctcagctctgattct
gaggatctgctggattccttcctcagcagcatcctgcaagcctcttttctttctagtcct
cacagcaacttttggcttctccaagattgcaggcaccatctgtgcgagcccgacatgaag
ctggtgtggcccagtgccaaactcctgcaggcagcagcgggtgcctccctccgcacctac
cactgcatcacccacagcgtcctgcccctgctgctggagcagtacaccaagcacacgcag
agcagccagaggaggacaatcctggaaatgctgctaggcttcctggagttgcagcagaag
tggggaaatgtggaagaaggtgaagatgagaacgctctgctgttgctccaagcccagatt
tgctccgtggtgttctcggcgctgctggatcccagtgtgcagctgcagctggttgggatc
aaagcactgactgtcctgggctccctgcaaggcttcctgtcttcctctaatctggagctg
gttgcggatcacctcatccgtcttgctctgcatgaggattcccagagcagtgaagcagca
atggaggcagctgggtccctggcccccaccttcccaaaggttttctctggacacatggta
cccaggcttaaagaggagctgcagtcagagcgggaggagaactaccacaaccgccactcc
ttgcagcagcgctgcctgcaggccctggcagctgtgtccacccacaccagcatcgtgagg
gagactgtccccatcctgctacagcatctccagaaggtgcagaaagggactgaggccagg
aacacccaagacatgatctccgtgtgccagagcctgcaccgtgtggccctgcagtgccag
caggatgccgagggctgctggtacttccaccagacggtggtgccgtgcctgctggccatg
gctgtgcaggcagccatgccagagagcactcatacactgccaggcaaggcactgctggag
gaagaggtgctggctgccatgatcccagtcatcagtgctgccaccactcacctgcgccct
gagctggctgcccagagtgtgtctcatgtggtgcccctctttctggatggagatgtctcc
ttcctaccccagaacagttttccctgctccttccagcctttcggggatggggagttcttg
gaggcacagagacgcctggttgccctcctcatggccttcatctgctccttgccccgcgat
gtggcaatccctcagcaggaatggctgctccgggagctgctggcattgagctgttcctgc
aactgtcccttcactgccaccacagctgccaagtgctttgcagggctggtgaacaagcac
ccagcagggcagcagctggatgaaatcctgcagcttgcagtgaacaggatggagcccagc
cttgcagaggggccccgccgaacgcaggcactcaccctgctgctctgggtgaccaaagcc
ctggtgctgcgctaccaccccctaagctcttgcctgacagacaagctgctgggcctgctg
ggtgacacggagctgggccctgccacagccgatggcttctccttgctcatggccgagtcc
ccggacgtgctgcacaagggctgccacgctgacgtgcgcatcatgttccgccagcgcttc
ttcactgacaatgtccccaagctggtgcaaggcttccatggggccggccccgatgtgaag
gccaattacctgaagggcctgtcccatgtgctcaaccacctccccaaacctgtgctggtg
acagagctgcccacgcttctttccctcctgcttgaggccttgtcctgctcagatcgtgta
gtgcagctctccacactgagctgcctccacccactgctgctcgaagctccccagatcatg
agcctgcatgtcgacacactggtcaccaagttcctcaacctcacctccagccccaccatg
gctgtccgcatcgctgccctgcgctgtgcccacgcccttaccagtctgcccacaacagtg
ctgctcccatacaagggccgagttatccgggcactggccaagcctttggatgacaaaaag
aggctggtgcggaaggaagcagtggcagcacgcggagaatggttcctgcttgggagccca
ggcaggtga
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integrated database retrieval system
