Taeniopygia guttata (zebra finch): 100225723
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Entry
100225723 CDS
T01082
Symbol
NUP93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100225723 (NUP93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100225723 (NUP93)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100225723 (NUP93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
RP854
Motif
Other DBs
NCBI-GeneID:
100225723
NCBI-ProteinID:
XP_002189575
Ensembl:
ENSTGUG00000018220
UniProt:
A0A674GR74
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Position
11:12781167..12859581
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AA seq
819 aa
AA seq
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MDTDGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRRR
TFAMAEEYHRESMLVEWEQVKQRILHSLLASGEDALDFTQENEPSYVGEVGPPGRSSMDS
VEMAYARQIYIYNEKIVNGHLQPSLVDLCAATAGLDDKNISEMWAMVKQMTDVTLVPASD
ALKVRTNMEVRMEFVRHALHYLEESYKNYTFVTVFGNLHQAQLGGVPGTYQLVRSFLNIK
LPASVPGLQDGEVEGHPVWALIYYCMRCGDLTAAMHVVKRAQHQLGEFKTWFQEYMNSKD
RRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQ
VCFDDGGASSPQDRLTLSQFQKQLLEDYGESHFAVNQPPFLYFQVLFLTAQFEAAIAFLF
RTERLRCHAVHVALVLFELKLLLKASGQSAQLLSHEAGDPPGVRRLNFVRLLMLYTRKFE
STDPREALQYFYFLRNEKDSQGENMFLRCVSEIVIESREFDMILGKLEKDGSRKPGVIDK
FTSDTKSIINKVASAAENKGLFEEAAKLYDLAKNPDKVLELMNKLLSPVVPQISTPQSNK
ERLKNMAHSIAERYKAQGISAKKSIDSTFYLLLDLITFFDEYHAGHVDRAFDIIERLKLV
PLSQDCVKERVAAFRNFSDEIKHNLSEVLLATMNILFTKYKRMKGTSPTTPARPQRVMED
RDSQLQSQARALIMFAGMIPYRTSGDTNARLVQMEILMN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatggctttggagagctgctgcagcaggccgagcagctggcggccgagaca
gaggggatctcggagctcccgcacgtggagcgcaacctgcaggagatccagcaggccggg
gagcgcctgcgctcccgcaccctgacccgcacctcccaggagactgccgatgtcaaggca
tcggttcttcttgggtctagagggcttgatatatcccacatttctcagagacttgagagt
ctaagtgcagccactacatttgagcctcttgaacctgtgaaggacactgacatccaggga
ttcctgaagaatgaaaaagataatgcattgctatctgccattgaagagtctaggaggagg
acttttgccatggctgaggagtatcaccgagaatcaatgctggttgaatgggagcaggtg
aaacaaaggattcttcattctctgcttgcatcaggggaagatgctcttgatttcacccag
gaaaatgagcccagctatgttggtgaggtgggtcctccaggtcgcagctccatggacagt
gtggagatggcatatgctcgtcagatttatatttataatgagaagatagtgaatggacat
ctgcagcctagcctggtggacctctgtgctgctactgcaggcctggatgataagaacatc
tccgagatgtgggccatggtgaaacaaatgaccgatgtcaccctggttcctgccagcgat
gccctgaaagtccggaccaacatggaagtgcgcatggagttcgtgaggcacgctctgcac
tacctggaggagagttacaaaaattacacttttgtgacagtctttggaaacttgcaccag
gctcagctgggtggagtcccaggcacctaccagctggtccgcagcttcctgaacatcaaa
ctcccggcgtctgtccctggtctgcaggatggtgaggtggagggccatcctgtgtgggca
ctgatttactactgcatgcgctgtggagatctgactgcagccatgcatgtggtgaaacgg
gcacagcaccagctgggagagttcaaaacctggttccaggagtacatgaacagtaaagac
agaagactgtctcctgccacagaaaataaactgcgtcttcattacagacgagctctgaga
aataacactgacccctacaaaagggctgtttattgcattattggccgttgtgacattaca
gacaaccagagtgaagttgctgataaaacagaagattatctttggctaaaactgaaccaa
gtgtgttttgatgatggtggcgcgagctccccgcaggaccggctaacgttatctcagttc
caaaagcagctgctggaagactatggtgaatcacattttgcagtgaaccagccaccgttc
ctctacttccaggtgttgttcttgacagcacagtttgaagctgcaattgcttttcttttc
cggacagagcgcttgcgctgtcacgctgttcatgttgctttggtcctgtttgagttaaaa
ttgctcctgaaagcatctgggcagagtgcacaactattaagccatgaagctggtgaccct
cctggtgtcagacgtttaaattttgtgcggcttttgatgctttacacccgtaagtttgaa
tcaacagatccacgggaagctctgcagtacttttactttctcaggaacgagaaggacagc
caaggagagaatatgttcttgcgttgcgttagtgaaatagtaattgaaagcagagagttt
gatatgattcttggaaagctggaaaaggatggtagtaggaagcctggagtgatagacaag
tttacaagtgacacaaaatccattattaacaaagtggcttctgcagcagaaaataaagga
ttgtttgaagaagccgcaaaactctatgaccttgcaaagaaccctgacaaagttttagaa
ctgatgaacaagctccttagtccagttgttccccagatcagcactccccagtcaaacaag
gagcgtttgaagaacatggcccattccattgctgagaggtacaaagcgcaggggataagt
gcaaagaaatccattgactccacgttctaccttctgctagacttaatcacgttttttgat
gaatatcacgctggtcacgttgacagggcctttgatattattgaacgcctgaagcttgta
cctcttagccaagattgcgtcaaggagagagtcgctgccttccggaatttcagcgatgaa
atcaaacacaatttatctgaggtcctgcttgcaaccatgaatattttattcaccaagtat
aagaggatgaaaggcacaagcccaaccactcctgccaggccccagcgggtaatggaagac
agagattcgcaacttcagtctcaagctcgggcactgataatgtttgctgggatgatccca
tacagaacatcaggagacacgaacgcaagactggtgcaaatggagatccttatgaattag
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