Taeniopygia guttata (zebra finch): 100225826
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Entry
100225826 CDS
T01082
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100225826 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100225826 (WDR43)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100225826 (WDR43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Utp12
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_Aladin
EIF3I
Beta-prop_TEP1_C
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
DUF6235
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
UTP15_C
Beta-prop_ACSF4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
100225826
NCBI-ProteinID:
XP_030124725
Ensembl:
ENSTGUG00000005464
UniProt:
H0Z4Y3
LinkDB
All DBs
Position
3:91298257..91321732
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AA seq
648 aa
AA seq
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MAAAPCAFSPRGCRLFASAGSDGRLRVWDTAGSRLQHEFVPSAHLSAACTCLAWAPLEAR
QPLGKDGPQRKKRKSEGGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVNC
VRWHQESCCLYSCSDDRHIVEWNTQTCKVKCKWKGDNSSITCLCISPDGKMLLSAGRTIK
LWDLETKEVYRHFTGHATSVSSLIFTTVKPTNESKPFDGITGLYFLSGAIHDRLLSVWQI
RSDRKEKNAVMSFAVTDEPTFVDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKPL
TSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNALQPIIEKVSLNTSESHI
CLVRDVQKVLSLRTDAAVTKVKTPAVNSDAKVLVPGIPGHSTAVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAQILNKVLNTRKENI
VKNTVARMPMHAVIPLLHELTKRLQGNPYSASLMVRWLKSVLTLHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVSQVAASQTVQEVPEVNQTAKLVYEDDSSEEEGS
DDEMIADKDSDENWDEDEDEQSDEQEMTVEKEVNGDSDLEPENESEEE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctccgtgcgccttctccccccgcgggtgccgcttgttcgcctcggccggg
tccgacgggaggctgcgagtgtgggacacggccggcagccgcctacagcacgagttcgtg
ccctccgcccacctcagcgccgcctgtacctgcctggcctgggccccgctggaggcgcgg
cagcccctcgggaaggatggcccccagaggaaaaaacggaagtctgaaggtggagaagtg
gacaagcagttagatatcctggctattggtacagcagttggtagcattttgttatacagc
acagtaaaaggagaattacagagcaagctagacggtggtcatgacagtagagtaaactgt
gtgagatggcatcaagagagctgctgcttgtatagctgttcagatgacagacacattgtg
gaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagtatc
acctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaacgataaaa
ctgtgggacttggagaccaaagaagtctacagacatttcacaggtcatgctacatcagtg
tcatcattaatatttaccacagtgaaacctacaaatgaaagtaaaccctttgatggaatt
acaggactttatttcttgtctggagctatacatgaccgattactgagtgtttggcagatc
agatcagataggaaagaaaagaatgctgtaatgtctttcgcagtaacagatgaaccaact
tttgtggacctgactgtatcagaagtcaaagaagagcctgtgaagttagcagttgtgtgc
agagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaaaccctta
acatcaaactgtactattcagatagcaacacctgggaacgatggggactccacaccgaag
ccagtccctattctagcagctgcattttgcacagacaaacagtctctgctgctggtgtat
ggaaacgccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggatgtccagaaagtgttgtcacttagaacggatgctgctgtaacaaag
gtaaagacacctgctgtgaactcggatgccaaagttctagtacctggcattccaggacat
agtacagctgtcaaaactccagccttgggaaaggaaaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcattgaggagcgccttggggcattggatattgatgtgagcaaa
gtcaaaactcctggtggccttccccaaacagacagctttgctgtgctgctggttcagggc
ttggaaagcaacgatgcacaaatcttaaataaagtgcttaacacaaggaaagaaaatata
gtaaagaacacagtagccagaatgcctatgcatgctgtcattccactgctgcatgagctt
acaaagagattgcaaggcaacccgtacagtgcctcactaatggttcgatggttgaagtct
gttcttaccctacatgcatcctatctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactttgcaaaagctttctcgtctgcat
ggaagactcttcattcttgtctcccaggttgcagcatcacaaacagttcaggaggtaccc
gaggttaatcagactgcaaagttggtctatgaggatgactcttcagaggaggaaggctca
gatgatgagatgattgcagataaagactctgacgaaaactgggatgaagatgaagacgag
caatctgatgaacaagaaatgactgttgaaaaggaagtcaatggtgattctgatttggaa
ccagaaaatgaaagtgaagaagagtaa
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