KEGG   Taeniopygia guttata (zebra finch): 100225826
Entry
100225826         CDS       T01082                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100225826 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tgu03009]
    100225826 (WDR43)
Ribosome biogenesis [BR:tgu03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100225826 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Utp12 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st DSE1_N Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_Aladin EIF3I Beta-prop_TEP1_C Beta-prop_RIG_1st Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 DUF6235 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st UTP15_C Beta-prop_ACSF4 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 100225826
NCBI-ProteinID: XP_030124725
Ensembl: ENSTGUG00000005464
UniProt: H0Z4Y3
LinkDB
Position
3:91298257..91321732
AA seq 648 aa
MAAAPCAFSPRGCRLFASAGSDGRLRVWDTAGSRLQHEFVPSAHLSAACTCLAWAPLEAR
QPLGKDGPQRKKRKSEGGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVNC
VRWHQESCCLYSCSDDRHIVEWNTQTCKVKCKWKGDNSSITCLCISPDGKMLLSAGRTIK
LWDLETKEVYRHFTGHATSVSSLIFTTVKPTNESKPFDGITGLYFLSGAIHDRLLSVWQI
RSDRKEKNAVMSFAVTDEPTFVDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKPL
TSNCTIQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNALQPIIEKVSLNTSESHI
CLVRDVQKVLSLRTDAAVTKVKTPAVNSDAKVLVPGIPGHSTAVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAQILNKVLNTRKENI
VKNTVARMPMHAVIPLLHELTKRLQGNPYSASLMVRWLKSVLTLHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVSQVAASQTVQEVPEVNQTAKLVYEDDSSEEEGS
DDEMIADKDSDENWDEDEDEQSDEQEMTVEKEVNGDSDLEPENESEEE
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggcggccgctccgtgcgccttctccccccgcgggtgccgcttgttcgcctcggccggg
tccgacgggaggctgcgagtgtgggacacggccggcagccgcctacagcacgagttcgtg
ccctccgcccacctcagcgccgcctgtacctgcctggcctgggccccgctggaggcgcgg
cagcccctcgggaaggatggcccccagaggaaaaaacggaagtctgaaggtggagaagtg
gacaagcagttagatatcctggctattggtacagcagttggtagcattttgttatacagc
acagtaaaaggagaattacagagcaagctagacggtggtcatgacagtagagtaaactgt
gtgagatggcatcaagagagctgctgcttgtatagctgttcagatgacagacacattgtg
gaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagtatc
acctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaacgataaaa
ctgtgggacttggagaccaaagaagtctacagacatttcacaggtcatgctacatcagtg
tcatcattaatatttaccacagtgaaacctacaaatgaaagtaaaccctttgatggaatt
acaggactttatttcttgtctggagctatacatgaccgattactgagtgtttggcagatc
agatcagataggaaagaaaagaatgctgtaatgtctttcgcagtaacagatgaaccaact
tttgtggacctgactgtatcagaagtcaaagaagagcctgtgaagttagcagttgtgtgc
agagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaaaccctta
acatcaaactgtactattcagatagcaacacctgggaacgatggggactccacaccgaag
ccagtccctattctagcagctgcattttgcacagacaaacagtctctgctgctggtgtat
ggaaacgccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggatgtccagaaagtgttgtcacttagaacggatgctgctgtaacaaag
gtaaagacacctgctgtgaactcggatgccaaagttctagtacctggcattccaggacat
agtacagctgtcaaaactccagccttgggaaaggaaaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcattgaggagcgccttggggcattggatattgatgtgagcaaa
gtcaaaactcctggtggccttccccaaacagacagctttgctgtgctgctggttcagggc
ttggaaagcaacgatgcacaaatcttaaataaagtgcttaacacaaggaaagaaaatata
gtaaagaacacagtagccagaatgcctatgcatgctgtcattccactgctgcatgagctt
acaaagagattgcaaggcaacccgtacagtgcctcactaatggttcgatggttgaagtct
gttcttaccctacatgcatcctatctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactttgcaaaagctttctcgtctgcat
ggaagactcttcattcttgtctcccaggttgcagcatcacaaacagttcaggaggtaccc
gaggttaatcagactgcaaagttggtctatgaggatgactcttcagaggaggaaggctca
gatgatgagatgattgcagataaagactctgacgaaaactgggatgaagatgaagacgag
caatctgatgaacaagaaatgactgttgaaaaggaagtcaatggtgattctgatttggaa
ccagaaaatgaaagtgaagaagagtaa

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