Taeniopygia guttata (zebra finch): 100225837
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Entry
100225837 CDS
T01082
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100225837 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100225837 (CAPN3)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
100225837 (CAPN3)
Peptidases and inhibitors [BR:
tgu01002
]
Cysteine peptidases
Family C2: calpain family
100225837 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
EF-hand_4
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
100225837
NCBI-ProteinID:
XP_030131357
Ensembl:
ENSTGUG00000011081
LinkDB
All DBs
Position
5:25954264..25980835
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AA seq
809 aa
AA seq
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MPTAINAVVAQQTAAGSVPSTAAGTTEGAGGGTGGIYSAIISRNQPIIHVKEKTYEELHK
KCLEKNILYEDPDFPPNESSLFYSQKSPVKFEWKRPREICENPRFIIGGANRTDICQGEL
GNCWFLAAIACLTLNKKLLCRVIPHDQSFIQNYAGIFHFQFWRYGNWVDVVIDDCLPTYN
NQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DIYKIMKHAIDRGSLMASSIDDDLGFSYGSAPRSNIGELIARMVKNQENAQMTQSTVDYQ
GMEERPAWTIVPMQYETRMSCGLVMGHAYSVTAVEETVFKGEKIRLVRLRNPWGQVEWNG
AWSDKSEEWDSVNEAEKIRLQHKVVEDGEFWISFQDFMRHFTKLEICNLTPDTLEVDKFQ
TWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPEDEEVICSFLVALMQK
NRRKERKLGANLYTIGFAIYEVPKEMHGTKHHLQKDFFLYNASKARSKTYINMREISERF
RLPPSEYVIIPSTYDPHQEGEFILRVFSEKRSLSEEVENMIEAEHPLKKKGKPIIFVSDR
ANSNKELTTDENAGKDGEKTQTDEKKRSSTKAHEESEEQKQFRNIFRQIAGDDMEINAEE
LRNVLNNVVKKHKDLRSEGFELESCRSMIALMDTDGSGKINFDEFRHLWDKIKSWQKIFK
RYDTDHSGTINSYEMRNAVKDAGFRLNNQLYDIITMRYADKNMNIDFDSFICCFVRLDAM
FRAFHAFDKDGDGIIKLNVLEWLQLTLYA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgccatcaatgcagtggtggctcagcaaacggctgctgggtcagtccccagc
accgctgctggcactacggagggggcaggagggggcacagggggcatttattctgccatt
ataagtcgcaatcagcccattatccatgtaaaggagaagacctatgaagagcttcacaag
aagtgcctggagaaaaacattctctatgaagatcctgatttcccaccaaatgagtcgtct
cttttctacagccagaaaagccccgtcaagttcgaatggaaaagaccacgtgaaatctgt
gagaatccgcggtttattattggtggagccaatagaacagatatctgccaaggagaatta
ggtaactgctggtttctggctgccattgcttgcctgacactgaataaaaaactactctgt
agagtcatacctcacgaccagtcctttatacaaaactatgctggcatctttcacttccag
ttctggcgctatggaaattgggtggatgtcgtcatcgatgactgcttacccacctacaac
aaccagctggtctttaccaagtcctcccagcgcaacgagttctggagcgccctcctggag
aaggcctatgcaaaactccatgggtcatatgaagctttgaagggaggcaacaccactgaa
gccatggaggacttcactggaggagtcacagagttctatgagataaaggatgcacctaaa
gatatctataaaatcatgaaacatgccattgacagaggatcgctcatggccagttccatt
gatgatgacctagggttttcgtatggatcagctcctcggagcaacattggggaactgatt
gctcgcatggtgaagaatcaagaaaacgcccagatgactcagtccactgtagactaccag
ggcatggaggagaggccagcctggaccatagtgccgatgcagtacgagacacggatgtcc
tgcgggctggtcatggggcacgcctactccgtgacggccgtggaagagacagtatttaaa
ggtgaaaaaatacgtctggtaaggctgagaaacccctggggccaggtggaatggaatgga
gcctggagtgacaagtcagaggagtgggactctgttaatgaagcagagaaaatccgcctg
cagcacaaggtcgtggaggatggggagttctggatatcatttcaagatttcatgaggcac
ttcacaaagcttgagatctgtaacctcacacctgatactctggaagtggataaattccag
acctggactgtgtcagtcaatgaaggacgctgggtgagaggctgctcagctggaggttgc
cgcaattttccagatacattttggaccaatccccagtatcgcctgaagctcctggaggaa
gatgatgatcctgaggatgaagaggttatctgcagcttccttgttgcactgatgcagaaa
aacaggaggaaagagcgcaagctgggagccaacctgtacaccattggctttgccatctat
gaggtgcccaaagagatgcatggtactaagcaccacttgcagaaggattttttcctctac
aatgcctccaaagctagaagtaagacctacataaacatgcgagaaatctctgagcgcttc
cggttacctcccagcgagtacgtcatcatcccatcaacatatgacccccaccaggaggga
gaattcatcctcagggtcttctcagagaaaagaagtctttcagaggaggttgaaaatatg
attgaggcagaacatccattgaagaaaaagggcaagcctatcatcttcgtttctgacaga
gcaaacagcaataaggagctgacaacagatgaaaatgctggcaaagatggtgaaaaaacc
caaacagatgagaaaaagcgttcttcaacaaaagctcatgaggagagtgaagagcaaaaa
cagttcaggaatattttccgacagattgcaggggatgacatggagatcaatgctgaggaa
cttaggaatgttctcaataatgtcgtaaaaaaacataaggacctaaggtcagaagggttt
gaattggaatcctgccgcagcatgattgctctaatggatacagatggctcagggaagata
aactttgatgaatttcgacatctctgggacaagattaaaagctggcagaaaattttcaag
cgttatgacacggatcattcaggaaccattaacagctacgagatgcgcaatgcagtcaaa
gatgcagggtttcggctgaacaaccagctctacgacatcatcaccatgcgctacgccgac
aagaacatgaacatcgacttcgacagcttcatctgctgcttcgtgcgcctggacgccatg
ttccgggcattccacgcgtttgacaaagatggagatggcatcattaagctcaatgtcctg
gagtggctgcagctcaccctgtacgcctaa
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