Taeniopygia guttata (zebra finch): 100225888 Help Entry 100225888         CDS       T01082                                  Symbol COPA Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism tgu  Taeniopygia guttata (zebra finch) Brite KEGG Orthology (KO) [BR:tgu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tgu04131]     100225888 (COPA)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tgu04147]     100225888 (COPA) Membrane trafficking [BR:tgu04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     100225888 (COPA) Exosome [BR:tgu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100225888 (COPA)   Exosomal proteins of bladder cancer cells    100225888 (COPA) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_WDR41 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  100225888 NCBI-ProteinID:  XP_030147020 LinkDB All DBs Position 25:complement(2561919..2582801) Genome browser AA seq 1224 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWVLSSLHNGVIQLWDYRVGTLLDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQSVRVWDISGLRKKNLAPGAVESD VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH PNLNLFAAGHDGGMLVFKLERERPALAVHGNSLFYVKERFLRQLDFSSSRDVAVMQLRSG SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSILIKNLKNEITKKVPVPNCDEIFYAGTGNLLLRDSDSITLFDVQQK RTLASVKISKVKYVIWSADMSHVALLAKHAILVCNRKLESLCQIHENVRVKSGAWDESGV FIYTTSNHIKYAVTSGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLSIDPTEFRFK LALINRKYDEVLHMVRNAKLVGQSIIAYLQRKGYPEVALHFVKDEKTRFSLALECGNIEI ALEAAKALDDKGCWEKLGEVALLQGNHQVVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM KIAEIRKDMSGHYQNALYLGDVAERVRILRSCGQKSLAYLTAATHGLDEEAESLRESFDP EKETIPAVDPEARLLQPPAPVLPLDTNWPLLTVSKGFFEGSIAGKGKGGALAADIDIDTV GTEGWGEDAELQLDEDGFVDAGEGFGEEGMGKGQEEGGGWEVEEDLDLPPELDVPAGSTG TAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL QTFSRGRTTFQALPSLPAMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG KFEEAVEKFRLILLSVPLLVVDNKQEIAEAQQLVAICREYIVGLSMEIERKKLPKETLEQ QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKSAATFARRLLELGPKPEVAQQ TRKILAACEKNPVDSHQLNYDQHNPFDICAASYRPIYRGKALERCPLSGACYSPEFRGQI CRVTTVTEIGKDVLGLRISPLQFR NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgctgaccaaattcgagaccaaatcggcgcgggtgaaagggctgtcgttccacccgaag cggccgtgggtgctgagcagtctccacaacggcgtcatccagctctgggactaccgcgtg ggcaccctgctcgacaagttcgacgagcacgacgggccggttcgtggcatcgacttccac aagcagcagccgctcttcgtctccggcggcgatgactacaagatcaaggtgtggaattac aaactgcggcgctgcctcttcaccctgctgggccacctggattacatccgcaccaccttc ttccatcatgagtatccctggatcctgagcgcctccgacgaccaaacgatccgagtgtgg aactggcagtcgcgcacctgcgtctgcgtgctgacggggcacaaccactacgtgatgtgc gcccagttccaccccagcgaggacctggtggtgtcggccagcctggaccagagcgtcagg gtctgggacatctccgggctccggaagaagaacctggcccccggcgcggtggagtcggac gtgcgcggcatcaccggcgtcgacctcttcggcaccaccgacgccgtggtcaagcacgtg ctggagggccacgaccgcggggtgaactgggccgccttccacccctccatgcccctgatc gtgtccggcgccgacgaccgccaggtgaagatctggaggatgaacgagtccaaggcctgg gaggtggacacgtgccggggccactacaacaacgtctcgtgcgccgtgttccacccgcgg caggagctgatcctcagcaactccgaggacaagagcatccgcgtgtgggacatgtccaag cggaccggcgtccaaacgttccgacgcgaccacgaccggttctgggtgctggcggcgcat cccaacctcaacctcttcgctgccgggcacgacgggggcatgctggtgttcaagctggag cgggagcggccggcgctggccgtgcacgggaattcgctgttctatgtcaaggagcgattc ctgcggcagctcgacttcagcagctcccgcgacgtggccgtcatgcagctgcgcagcggc tccaagttcccggtgttcagcatgagctacaacccggctgagaacgccgtgctgctctgc acccgagccagcaacctggagaacagcacctacgacctgtacaccattcccaaggatgca gattcccaaaatcccgacgctccggaggggaagcgctcctcagggctcacggccgtatgg gtggcccggaaccgattcgccgtcctggacaggatgcactcgatcctgatcaagaacctg aagaacgagatcaccaagaaggttccggttcccaactgcgacgagattttctacgcgggc accgggaacctgctgctgcgcgactccgactccatcaccctcttcgacgtccagcagaaa aggactttggcctcggtgaagatctccaaggtgaagtacgtgatctggtcggccgacatg tcccacgtggccctgctggccaagcacgccatcctggtgtgtaaccggaagctggagtcg ctgtgccagatccacgagaacgtgcgggtcaagagcggcgcctgggacgagagcggcgtc ttcatctacaccaccagcaaccacatcaaatacgccgtcacctccggggaccacgggatc atccgcacgctggacctgccgatctacgtgacgcgggtgaagggcaacaacgtctactgc ctggaccgggagtgccggccccgcgtgctcagcatcgaccccaccgagttccgcttcaaa ctcgccctcatcaacaggaagtacgacgaggtgctgcacatggtgcggaacgccaaactg gtggggcagtcgatcatcgcgtacctgcagcggaagggctaccccgaggtggctctgcac ttcgtcaaggacgagaaaacacgcttcagcctggccctggagtgcggcaacatcgagatc gctctggaggcagccaaggccctggacgacaagggctgctgggagaagctgggcgaggtg gccctgctgcaggggaaccaccaggtggtggagatgtgctaccagcgcaccaagaacttc gaccgcctctccttcctctacctcatcaccggcaacctggagaagctgcgcaagatgatg aagatcgccgagatccgcaaggacatgagcggccactaccagaacgcgctgtacctgggg gacgtggccgagagggtgcggatcctgcgcagctgcggccagaaatccctggcgtacctg acggccgccacgcacgggctggacgaggaggccgagagcctgcgggaatccttcgatccc gagaaggagacgatcccggccgtggatcctgaggcgcggctgctgcagccgccggccccg gtgctgcccctggacaccaactggcccctgctgaccgtgtccaaaggcttcttcgagggc tccattgccgggaaagggaaaggaggagccctggccgctgacatcgacatagacaccgtg ggcactgagggctggggcgaggacgccgagctgcagctggatgaagacggattcgtggat gccggggaaggattcggagaggaaggaatgggaaaagggcaggaggaaggaggaggatgg gaagtggaagaagatttggatcttccccctgagctggatgtccccgccggctccacggga acagccgaggacggattctttgtgcctcccaccaaaggcaccagcccagcccaggtgtgg tgcaacaattcccagctccctgtggatcacatcctggcaggatcctttgagacagccatg aggctgctccatgaccaggtgggagtgaccaacttcgggccctacaagcagctcttcctg cagaccttctcccggggccgcacgacgttccaggcgcttcccagcctccccgccatgtac ggatacccgcaccgcaactggaaggaggccgggctgaagaacgcgctgccggccgtgggg ctgaagctgaacgacctgatccagcggctgcagctctgctaccagctgaccacggccggc aagttcgaggaggccgtggagaaattccgcctgatcctcctcagcgtgcccctgctggtg gtggacaacaagcaggagatcgccgaggcgcagcagctggtcgccatatgccgggaatac atcgtggggctgtccatggagattgagaggaagaagctgcccaaggagacgctggagcag cagaagaggatctgtgagatggccgcctacttcacgcactccaacctgcagcccgtgcac atgatcctggtgctccgcaccgccctcaacctcttcttcaagctcaagaacttcaagagc gccgccaccttcgcccggcgcctgctcgagctcggccccaagcccgaggtggcccagcag acgcggaagatcctggcggcgtgcgagaagaacccggtggacagccaccagctgaactac gaccagcacaaccccttcgacatctgcgccgcctcctaccggcccatctaccgcggcaag gccctggagaggtgtcccctgagcggcgcctgctacagccccgagttccgcgggcagatc tgccgcgtcaccacggtgacggagatcgggaaggacgttctggggctgcgcatcagccct ctccagttccgctag

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