Taeniopygia guttata (zebra finch): 100225894
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Entry
100225894 CDS
T01082
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100225894 (SMC6)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100225894 (SMC6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
FtsK_SpoIIIE
RnlA_toxin_N
Motif
Other DBs
NCBI-GeneID:
100225894
NCBI-ProteinID:
XP_030125868
Ensembl:
ENSTGUG00000013110
UniProt:
A0A674H5K8
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All DBs
Position
3:10300557..10345151
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AA seq
1095 aa
AA seq
DB search
MGKRKEGSVLTPGSQKRQRKEHTDVHNDVSNEEETLEFSANSSAPSQLPDGEVGIIESIQ
LKNFMCHSNLGPFQFGSNLNFVIGTNGSGKSSVLTALIVGLGGKATATNRGSSLKMFIQK
GETSADISITLRNQGRDAFKPELYGTSITVNQHINQDGSRTCKLKSKSGTIISSKKEELI
GMLDHFNIQVDNPVSVLTQEMSKQFLQTKNEGDKYKFFLKATQLEQMKEDYSFIGKTKTN
TRVQIEQGEERLEELKQLYLEKKEIFKSIAFVNDMQNRLKDLKHQMAWAVVSEMEKEIEL
LKEGIKAEEGNTELLQKVEECQVKVNEAEKKYKAIQDKLITVSEEAQALHPQCISLKAEV
QAKRKTVNETEIVYNRSKTELKRLEKDSEQLHKRIEELKSCANQDSEPEKLERQRRIAYL
REQLKAFHNEEIMIGQQMDQFQQAVSKCKEEHSRLRRESSEVQQALDAQQKQLRDLKDSK
TNTLKRFGPHVPAFLEAVEVAHRQGQFRKKPLGPLGALIHPKDPELILAIESCLKGLLQA
FCCDNHSDERTLQLLMSKYYKRGHRPQIIVNKFQNRVYDTSQRGVYHPEFPSVLTALEID
NPVVANCLIDMRGIERVLLIKNNRRAREVMQHNRPPRNCREAFTAAGDQVFERRYYSCNS
SRPQLLSQDVEAEISHLDNEIENKRAQLTASQHRLRSIENEIRQNEDHLYSHRRHQKQLQ
VKVRTANAEIADLENVEEHQSADIHILQEEAEENKGRMESVKQDMQLQSRKVEELKNTLQ
AAEKKLEEVKEKIHQVEEIAGPIKAELNQAESEVENSKRHLQHYEDKQREHVACINKHKD
LLVSKEKELEEKMSKARQIFPEPIKVSRTVKSLDAEMNRLREKINLESSHRGNREEIIQQ
FHYAKERYEDASNKVKNLRRFIAVLDEVMTERLKVYRQFLRKLSMQCKLHFEQLLRLRGY
SGHIMFDHKNETISITIQPREDEKTARSDLKSLSGGERSFSTVCFILSLWNISESPFRCM
DEFDVYMDMVNRRIAVDMILERADFQRHRQFILFTPLSMSSLPTSPHIRILRMPDPPKDQ
RTLNFQNRNDGDEDQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaaggaagtgttttaactcctgggtcccagaaaaggcagagaaaa
gaacacacagatgtacataatgatgtgtctaatgaagaagaaactttagaattctcagct
aatagtagtgccccttcacagctgcctgatggtgaggttgggataattgaaagtatccag
ctgaagaacttcatgtgccattcaaatctggggccttttcagtttggatcaaatctcaat
tttgttattggaaccaatggaagtggaaaaagttctgtattaacagcgctaattgttgga
cttggtggaaaagccactgcgactaacagaggttcctcattaaaaatgtttattcagaaa
ggagagacttctgcagatatttcaataactttgcgaaaccaaggaagagatgcatttaaa
ccagaattgtatggtacctctattactgtgaatcagcacattaatcaggatggaagcaga
acttgcaaactgaaaagcaaatctgggaccataatttcttcaaagaaggaagaactcata
ggaatgctggatcattttaatatacaggtagataatcctgtgtctgttttaacccaagag
atgagtaaacagtttttacagactaaaaatgaaggggacaagtacaagttttttttgaag
gcaactcagctggaacaaatgaaagaagattattcatttattggaaaaacaaaaacaaat
acccgtgttcagatagaacaaggggaagagcgtcttgaagaacttaagcagctttatttg
gagaagaaggaaattttcaaaagcatcgcatttgtgaatgacatgcaaaatcgtctcaaa
gatctgaaacatcaaatggcatgggcagtggtgagtgagatggaaaaagaaatagagctg
ctcaaagaaggcatcaaagctgaagaaggaaatacagaactccttcagaaggtagaagaa
tgccaggtaaaagtgaatgaagcagaaaaaaagtacaaagcaatacaagataaattgata
acagtaagtgaagaagcacaagcccttcatcctcagtgtatttctttgaaggctgaagtg
caggcaaaaagaaaaacagtcaatgaaactgagatcgtttataatcgttccaaaacggag
ttaaaacgtctggaaaaagacagtgaacagctacataaacgaattgaagaactgaaaagc
tgtgctaatcaggattcagagcctgagaaattggaaagacaaaggagaattgcatactta
agggaacagttaaaggcattccacaatgaagaaataatgattggtcagcagatggatcaa
tttcagcaggctgtatctaagtgtaaggaagaacattctagactcaggagagaaagcagt
gaagtgcaacaagcactggatgcccagcagaaacagctgagagacctgaaagatagtaaa
acaaacactttgaaaagatttggaccacatgtaccagcatttcttgaagcagttgaagta
gcccatagacaaggacaatttagaaagaaacctcttggacctttaggtgctttgattcat
ccaaaagatcctgaactgatcttggccatcgaatcctgtttaaaaggcctccttcaggca
ttttgctgtgataatcatagcgatgaaagaactctccagttactgatgtcaaaatattat
aaacgtggacatagacctcaaataattgtaaataaatttcagaatagagtttatgatact
agtcagagaggtgtttatcatccagaattcccatcagttctgacagcattggaaatagac
aatccagtggttgccaattgtttgattgatatgaggggtatagaaagagtcctgctaatt
aaaaataaccggagggctcgtgaggtaatgcagcacaatcggcccccaagaaactgtaga
gaagctttcactgctgcaggtgatcaagtatttgaacgacgctattactcttgcaattct
tccagaccccagctcctaagtcaagatgttgaagcagaaatcagtcacttggataacgaa
attgaaaacaaaagggcacagttgacagcctctcagcaccgcttacgttccattgaaaat
gagattaggcagaatgaagatcatctctatagtcatcggcgacaccaaaaacaactacag
gtaaaagtaagaacagcaaatgcagagatagcagatcttgaaaatgtggaagagcaccag
tcagcggacatccatatattacaagaagaagctgaagaaaataagggtaggatggaatct
gtaaaacaagacatgcagctacaaagcagaaaagtggaagaactgaaaaatactctccaa
gcagctgaaaaaaaattagaggaagtgaaagaaaaaattcatcaagtagaagaaattgct
ggcccaattaaggctgaattaaaccaggctgagtcagaagtggaaaacagtaaacgccat
ttgcagcactatgaagacaaacagagagaacacgttgcttgcataaataagcacaaagat
ttacttgtttccaaagaaaaggaattagaggaaaaaatgtcaaaagcaaggcaaatcttc
ccagagcccatcaaggtcagcagaactgttaaaagtcttgatgcagaaatgaatcgcttg
agagagaagataaatttagaaagcagtcaccgtggaaacagagaagaaataatacagcaa
tttcattatgcaaaggaaagatacgaggatgcaagcaataaagtgaagaacttaaggaga
tttattgcagtgctggacgaagtaatgacagagaggctcaaagtgtatcggcagttccta
aggaaactttctatgcaatgcaaactccactttgagcagttattacgtcttcgaggttac
tctggacatataatgtttgaccacaagaatgagacaatttccataacaattcagcctcga
gaggatgaaaaaactgcccgtagtgatctgaaatccttatcaggaggtgaacgttccttc
tccacagtttgtttcattctttctctgtggaacatttctgaatctcctttcagatgcatg
gatgaatttgatgtctacatggatatggttaacagaagaattgccgttgacatgattctg
gagagggctgattttcagcggcatcgacagttcattttgttcacccccctgagcatgagt
tctctgcctacgagtccccatattcgaatcctccgcatgccagaccctccaaaagaccaa
agaacactgaatttccaaaataggaatgacggagatgaagatcaataa
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