Taeniopygia guttata (zebra finch): 100226237
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Entry
100226237 CDS
T01082
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100226237 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100226237 (REXO1)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
Pre-60S particles
RNases
100226237 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
100226237
NCBI-ProteinID:
XP_030112526
Ensembl:
ENSTGUG00000000250
LinkDB
All DBs
Position
28:complement(1507366..1549459)
Genome browser
AA seq
1230 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLPLG
HGAERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISNTPVSAAGPQNDSFASLEYNPGSYSFNNNSDYNPTPLAAA
GRSSKYTLDSSRSKGSSLEYVPKAVIQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKATTKGSKRERASDYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASG
SSPSKAGSESESNEFSSKEQSTKVDGFASQESKEAAQHREDLPNSQKNLAKSSSDKNSKA
AKLCSGKNNKEIENKNKDSKDKTKKKKIDVSKAPGLSEAGKKEKNKNADKDKALKKEEKL
KTKNEDKNCKDKSIKVKTDGNLKKPEKQKSEKVDGHKKEKSKSTTSSSGKSKSEGVTKGT
EKVGNSKKDSQSRTADVKNGKESSGRKNKEKGTKTSLERKKDKVSCAGQGDPKKGRKQQS
LSHVDLFGDESGDEDDKGRPLSSSLLDVSSDLDGADSGSASDSDKDRRKKVKRSKLSKSS
SSSSTSDDIDYSILEKDVDFETDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKT
EDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLVG
TVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKATVGGRSVTPSNDSEAPTLPLKPC
TLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLK
FCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPSSTNKTSNKKVV
SHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEK
AGRAVLFTAEEKKVIDSSCRICCRCGTEYMVSASGSCIRKEECVHHWGRLRKQRVPGGWE
THYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTK
QGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLN
MFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQD
NVEGHDSSEDARACMELMVWKIREDAKVKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctaaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccacttccggcaccccccggtggcc
ccggcaccgtgcggagcctccggagcctcgggcgaccccagcgtggggctcccgctcgga
cacggcgcagagcgaggctatgatccctacaaccccgagctgcccaggccctcgctggag
gtggaggatggctttctggctgacatcacagatgtcacacccggaattctggagctggag
ctggtcaacaaggccattgaggcagtgaagaacgaagtggagagggagcagaagaagtat
gaggagctgctggaaaccacgaaggagtttggtgcttcagagggctcctcactcatttca
aacacacctgtgtcagctgctgggcctcagaatgattcctttgcctcactggagtacaat
ccagggagctacagcttcaataataactcagattacaaccccactcctctggctgctgct
ggccgatccagtaaatacactttggattcctcccgctccaaagggagctcactggaatac
gtccccaaggctgtaatacagaataaaaaatacagcagcactgtcactaacaacaaatac
gtgattgatgactccaagccttccacagacttggaatatgaccccctttccaattactct
gccaggctgttgggcaaagccacaaccaagggctccaaaagggaaagggcctctgattat
gaggactcctactctccatcacggaagaagctctgcgaagatcccgatgatgacgaggtg
ttggccaggttctcctcctctgaagatgaggctgaggtagaatataaaacagcttctggt
agttcaccctcaaaagctggttctgagagtgagtcaaatgagttctccagcaaagagcag
agcacaaaagtggatggcttcgcttcccaggagagcaaagaagcagcacagcacagggag
gaccttccaaattcacagaaaaaccttgccaagagctcatccgacaagaactcaaaggca
gcgaagttgtgttctggtaagaacaacaaggaaattgaaaataaaaacaaagattccaaa
gacaaaacaaaaaagaagaaaatagatgttagtaaagcaccaggcctcagtgaggctggg
aagaaggagaaaaataaaaatgcagacaaagacaaagcgctcaagaaagaagaaaaatta
aaaaccaagaatgaagataaaaactgtaaagacaaaagcatcaaagtgaaaacagatggg
aacttgaagaaacctgaaaaacagaagtcagaaaaagtggatgggcataagaaagaaaaa
tccaagtccaccaccagcagctcagggaaaagcaagagcgagggtgtcaccaagggcaca
gagaaagtggggaacagcaagaaggattcacagagcagaacagctgatgtgaaaaatggc
aaggaaagctctggtcgtaaaaacaaggagaaagggaccaagacctccctggagcgaaag
aaagacaaggtcagttgtgcaggacaaggagaccccaagaagggtcggaagcagcagagt
ttgagccacgtggacctgtttggagatgagagtggagatgaggatgacaaaggccggcct
ttgtcctcctccttacttgatgtgagctcggacttggatggggctgactctggctcagcc
tctgacagtgacaaggacaggaggaagaaagtgaagcgctcgaagttgtccaagtcctca
tcatcttcctcaacatctgatgacattgattattccatccttgagaaagatgtggacttc
gagacagatcccatggaggagtgtctcaggatctttaatgaatctaaagatgtaaaaact
gaagacaagggaaggctgggcaaacagccatccaaagaggaagcaaatgaagaaaagaca
gaagataatttaactaccttgtttcctggacaaaaaagaaggatctctcatcttgtcaaa
caaggaaatgcagaggccccgagcaagccggtggtgcggccctaccgtccccccacggcc
caggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggttggg
actgttcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcacgtgcca
aatgcagccctcaccgcagcagccaagcaaagcctcgggagcagtaaggcgactgttggt
ggcaggagtgtcacaccttccaatgactctgaagcccccacccttcctctgaagccttgc
accttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagcacat
gttccctccttacagagcaccactttacagaggcctgttattcccacagaatttggtgct
aaagtcccaaccaacattcgccagaggtatctcaatctcttcattgatgagtgcctgaaa
ttctgctcctcctcccaggaagccttcgacaaggccctggcagaggagaaggtggcctac
gagcgcagcaccagtcgcaacatctacctgaacgtggccgtgaacaccctgaagaagctc
cgcagcctcgtgcccaactccccatccagcaccaacaagacaagtaacaagaaggtggtg
tcccacgaggctgtgctgggagggaagcttgctgccaagaccagcttcactctgaaccgc
tcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggag
tacctgatgactgaggagcagctcaaggagaacgggtacccaatgcctcaccctgagaag
gctggacgtgctgtgctcttcactgcagaggagaagaaagtgattgactcctcatgcagg
atctgctgtcgctgtggcaccgagtacatggtctcagcctcggggagctgcatccgcaag
gaggagtgtgtccatcactgggggcggctgcgcaagcagagagtgccaggtgggtgggaa
acccactacagctgctgctctggagctgtggggtcaccaggctgtcaggttgctaaacaa
cacgtgcacgatgggcgcaaggagagcctggatggctttgtgaagacttttgagaagctg
cccacgactgatggctaccctgggatctacgccttagactgtgaaatgtgctacactaag
caaggactggagctgacgagagtaactgtgatcaactcggagctgaaagtggtgtacgac
acctttgtcaagccagactccaaggtggtggattacaacaccagattctcaggtgtgaca
gaggaggacctggagaacacgagcatcaccctgcgggatgtccaagccgtcctactgaac
atgttcagtgcagacaccattctgatagggcacagcttggaaagcgacttatttgcacta
aagctgatccacggcaccgtggtggacacagccatcgtgttcccccaccgcctggggctg
ccctacaagcgggccctgcgcacgctgatggccgactacctcaaacgcatcatccaggac
aacgtggaaggacacgactccagtgaggacgccagagcctgcatggagctgatggtgtgg
aagatcagagaagatgccaaggtgaagcgatga
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integrated database retrieval system
