Taeniopygia guttata (zebra finch): 100226285
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Entry
100226285 CDS
T01082
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X2
KO
K12586
exosome complex component RRP43
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100226285 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100226285 (EXOSC8)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100226285 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100226285
NCBI-ProteinID:
XP_002196618
Ensembl:
ENSTGUG00000011908
UniProt:
A0A674HK29
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All DBs
Position
1:complement(62557189..62572689)
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AA seq
276 aa
AA seq
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MAAAFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPAADSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVIENSQMIV
KEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPSVTINEETGLSEVN
LKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKKLIDKVIKSITPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgttcaaaactgtggaaccattggaatattacaggaggtttttgaaggag
aactgtcggcctgatggaagagagctaggtgaatttcggacaaccactgtcaacataggt
tcaattacaactgcagatggttctgccctggtgaagttaggaaataccacagtgatttgc
ggagtaaaagcggaacttgctgcacctgcagcggattctgctaacaagggatatattgtt
ccgaatgttgagctgccatccctctgtgcagagaggtttcgctctggaccacctggtgaa
gaggctcaagcagcaagccagttcattgcagatgtgattgaaaattcacagatgatagtg
aaagaagatctgtgtattgccaatggcaagcttgcgtgggtgttatactgtgatatcata
tgtctggattatgatggaaaccttctggatgccagtgtctttgctttgttggcagcatta
aaaaatgtgcaattgccatcggttacgataaatgaagaaactggtttatcagaagttaat
ttaaaacagaagaatcctttgattatcagaaagcatccagttgccacatcatttgctata
tttgatgacacgctactcattgttgatccaactgctgaagaagaagatttagcaactgga
acagtaaccattgtaactgatgaagaaggcaggctgtgttctgtccataaaccaggtgga
agtcctcttacaggagccaagcttcaggactgtatcaccagagcaattacaagacacaaa
gaagtaaagaagctgatagacaaagtaataaaaagtataacacccaagtga
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