Taeniopygia guttata (zebra finch): 100226298
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Entry
100226298 CDS
T01082
Symbol
NEDD1
Name
(RefSeq) protein NEDD1 isoform X2
KO
K16547
protein NEDD1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100226298 (NEDD1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100226298 (NEDD1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
100226298 (NEDD1)
Microtubules and associated factors
gamma-tubulin ring complex
100226298 (NEDD1)
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100226298 (NEDD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EIPR1
eIF2A
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WD40_like
KNTC1_N
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
100226298
NCBI-ProteinID:
XP_002189776
Ensembl:
ENSTGUG00000008696
UniProt:
A0A674GJL7
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Position
1A:43852211..43881699
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AA seq
655 aa
AA seq
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MQEGIRFASSGDDIKIWDSSSFTVVEQFNPHTPSHPVSSLCWASNNRYLATASAAGDKII
VSSCKSKPVPLFEIAEGAKQTCVSLNSSSSYLVSGGLDNTVNIWDLKSRKIYRSLKEHKD
EITCVAYNWNDGYIVSGSLSGEIILHSVTTNLSSSPFGYGSRQPIRHLKYSSFKKSLLGT
VSDSGNVTLWDVNSQNPYHNFENTHKAPASEICFSPVNKLLLVTVGLDKRIILYDTFSKK
LLTTIVADFPLTTVDFMPDGTTLAIGCSRGKICQYDLRQLTSPVKAVTAHKGCVKCIRLQ
FSSSFSKSNITGSSTKPVSKRVEVKAGSNLGGIQNTGVKNIASQASATVSSHLTLTNETK
GGEIFQEKTGFPHSSSLDVIPSKEADHGKSAELSNFDDLGRSSLGDVFSPVRDDIIANKM
TEDPQGNGLDFQSCLLGFDFLPQPTIAFPVKRNLVGSSAPGTQSSPLHALVGSPIKEEEE
HPETDSKKISLGRQESKDILKQVSKSSLSSIEPSPLSFTPDVNEKLMKTIQAHPTYDLPV
NGTTTTSSKIASPVTAGVASSLSEKIVETIGSSRPNAPLTAIQINFIQNMIQETMDDFRE
ACHRDIVNLQVEMIKQFHMQLNEMHALLERYSVNESLVAEIERLREENKRLRTHF
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaggcatacgttttgcatcatcaggagatgatattaaaatatgggattcctca
tctttcactgtggtggagcagttcaacccacatacaccgtcacatccagtcagttcactg
tgctgggccagcaataatagatacctggctactgcttctgctgctggtgataaaataatt
gtttcaagctgtaaaagcaaacctgtccccctctttgaaatagctgaaggagcaaaacag
acatgtgtgagcttgaattctagttcttcgtatcttgtcagtggaggccttgataacaca
gttaatatctgggatctaaagtccagaaagatttaccgcagcctaaaggagcataaagat
gaaatcacatgtgttgcatataattggaatgatggctatattgtttctggatctttgagt
ggtgaaatcatcctacacagtgttaccaccaatttatcaagtagtccctttggttatggc
agcagacagcctattcgacacttgaaatattcatcctttaagaaatccttgctgggcact
gtttctgacagtggaaatgtaactctctgggatgtaaatagccagaacccatatcataat
tttgaaaatactcataaagcaccagcctcagaaatctgcttttctccagtcaataagctg
ctgcttgtaactgtaggtttggataaaagaattattctctatgacactttcagtaaaaag
ttactgacaacaattgtagctgattttcctctaaccacagtagacttcatgcctgatggt
actactttggctataggatgttcccggggaaagatctgccagtatgacttaagacaactg
acatcaccagtgaaagcagttactgctcacaaaggctgtgtgaaatgcatacgtcttcag
ttcagcagcagtttttccaagtctaacattacaggttcttcaactaaacctgtgtccaaa
agagtagaagtcaaagctggtagtaatcttggaggaattcaaaatactggcgtcaaaaac
attgcctctcaagcatcagcaacagtttcatctcatcttacactgacaaatgagactaag
ggaggagagatttttcaggagaaaacaggttttccccatagttccagcttggatgtcatt
ccatctaaagaagcagatcatgggaaaagtgctgaattaagtaattttgatgatttgggt
cgaagtagtttaggagatgtgttctctccagtcagagatgatattattgcaaataaaatg
actgaagatcctcaaggaaatggcttggatttccagtcctgcctgttaggttttgatttt
ctcccacagccaaccattgcctttccagtaaaaagaaacctagtgggcagcagtgcaccg
gggacacagtctagcccattacatgcacttgttggatctccaattaaagaagaagaggaa
catccagagactgactctaagaaaataagtcttggaagacaagaatctaaagacatcttg
aagcaggtttcaaaatcaagcttatcaagcatagaaccttctccactatcatttactcct
gatgtaaatgagaaactaatgaagacaattcaggcccatccgacatatgatctaccagta
aatggtactaccacaacaagttcaaagatagcatcacctgtcactgctggagttgcaagt
tcgttgtcagaaaaaatagtagaaaccattgggagtagcagaccaaatgcacctctgaca
gcaattcaaataaacttcattcagaatatgatacaagaaacaatggatgacttcagagaa
gcatgccatcgagatattgtgaatttgcaagtggagatgatcaagcaattccatatgcag
ttgaatgaaatgcacgctttacttgaaagatactctgtaaatgaaagcttagtagctgaa
attgagagactacgagaggaaaacaaaagactgaggactcacttctga
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