KEGG   Taeniopygia guttata (zebra finch): 100226298
Entry
100226298         CDS       T01082                                 
Symbol
NEDD1
Name
(RefSeq) protein NEDD1 isoform X2
  KO
K16547  protein NEDD1
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tgu03036]
    100226298 (NEDD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tgu04812]
    100226298 (NEDD1)
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     100226298 (NEDD1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     100226298 (NEDD1)
Cytoskeleton proteins [BR:tgu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     100226298 (NEDD1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_EIPR1 eIF2A NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_Vps41 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_like KNTC1_N Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 100226298
NCBI-ProteinID: XP_002189776
Ensembl: ENSTGUG00000008696
UniProt: A0A674GJL7
LinkDB
Position
1A:43852211..43881699
AA seq 655 aa
MQEGIRFASSGDDIKIWDSSSFTVVEQFNPHTPSHPVSSLCWASNNRYLATASAAGDKII
VSSCKSKPVPLFEIAEGAKQTCVSLNSSSSYLVSGGLDNTVNIWDLKSRKIYRSLKEHKD
EITCVAYNWNDGYIVSGSLSGEIILHSVTTNLSSSPFGYGSRQPIRHLKYSSFKKSLLGT
VSDSGNVTLWDVNSQNPYHNFENTHKAPASEICFSPVNKLLLVTVGLDKRIILYDTFSKK
LLTTIVADFPLTTVDFMPDGTTLAIGCSRGKICQYDLRQLTSPVKAVTAHKGCVKCIRLQ
FSSSFSKSNITGSSTKPVSKRVEVKAGSNLGGIQNTGVKNIASQASATVSSHLTLTNETK
GGEIFQEKTGFPHSSSLDVIPSKEADHGKSAELSNFDDLGRSSLGDVFSPVRDDIIANKM
TEDPQGNGLDFQSCLLGFDFLPQPTIAFPVKRNLVGSSAPGTQSSPLHALVGSPIKEEEE
HPETDSKKISLGRQESKDILKQVSKSSLSSIEPSPLSFTPDVNEKLMKTIQAHPTYDLPV
NGTTTTSSKIASPVTAGVASSLSEKIVETIGSSRPNAPLTAIQINFIQNMIQETMDDFRE
ACHRDIVNLQVEMIKQFHMQLNEMHALLERYSVNESLVAEIERLREENKRLRTHF
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgcaagaaggcatacgttttgcatcatcaggagatgatattaaaatatgggattcctca
tctttcactgtggtggagcagttcaacccacatacaccgtcacatccagtcagttcactg
tgctgggccagcaataatagatacctggctactgcttctgctgctggtgataaaataatt
gtttcaagctgtaaaagcaaacctgtccccctctttgaaatagctgaaggagcaaaacag
acatgtgtgagcttgaattctagttcttcgtatcttgtcagtggaggccttgataacaca
gttaatatctgggatctaaagtccagaaagatttaccgcagcctaaaggagcataaagat
gaaatcacatgtgttgcatataattggaatgatggctatattgtttctggatctttgagt
ggtgaaatcatcctacacagtgttaccaccaatttatcaagtagtccctttggttatggc
agcagacagcctattcgacacttgaaatattcatcctttaagaaatccttgctgggcact
gtttctgacagtggaaatgtaactctctgggatgtaaatagccagaacccatatcataat
tttgaaaatactcataaagcaccagcctcagaaatctgcttttctccagtcaataagctg
ctgcttgtaactgtaggtttggataaaagaattattctctatgacactttcagtaaaaag
ttactgacaacaattgtagctgattttcctctaaccacagtagacttcatgcctgatggt
actactttggctataggatgttcccggggaaagatctgccagtatgacttaagacaactg
acatcaccagtgaaagcagttactgctcacaaaggctgtgtgaaatgcatacgtcttcag
ttcagcagcagtttttccaagtctaacattacaggttcttcaactaaacctgtgtccaaa
agagtagaagtcaaagctggtagtaatcttggaggaattcaaaatactggcgtcaaaaac
attgcctctcaagcatcagcaacagtttcatctcatcttacactgacaaatgagactaag
ggaggagagatttttcaggagaaaacaggttttccccatagttccagcttggatgtcatt
ccatctaaagaagcagatcatgggaaaagtgctgaattaagtaattttgatgatttgggt
cgaagtagtttaggagatgtgttctctccagtcagagatgatattattgcaaataaaatg
actgaagatcctcaaggaaatggcttggatttccagtcctgcctgttaggttttgatttt
ctcccacagccaaccattgcctttccagtaaaaagaaacctagtgggcagcagtgcaccg
gggacacagtctagcccattacatgcacttgttggatctccaattaaagaagaagaggaa
catccagagactgactctaagaaaataagtcttggaagacaagaatctaaagacatcttg
aagcaggtttcaaaatcaagcttatcaagcatagaaccttctccactatcatttactcct
gatgtaaatgagaaactaatgaagacaattcaggcccatccgacatatgatctaccagta
aatggtactaccacaacaagttcaaagatagcatcacctgtcactgctggagttgcaagt
tcgttgtcagaaaaaatagtagaaaccattgggagtagcagaccaaatgcacctctgaca
gcaattcaaataaacttcattcagaatatgatacaagaaacaatggatgacttcagagaa
gcatgccatcgagatattgtgaatttgcaagtggagatgatcaagcaattccatatgcag
ttgaatgaaatgcacgctttacttgaaagatactctgtaaatgaaagcttagtagctgaa
attgagagactacgagaggaaaacaaaagactgaggactcacttctga

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