Taeniopygia guttata (zebra finch): 100226440
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Entry
100226440 CDS
T01082
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100226440 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100226440 (SMARCA2)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100226440 (SMARCA2)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100226440 (SMARCA2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100226440 (SMARCA2)
Chromatin remodeling factors
BAF complex
100226440 (SMARCA2)
PBAF complex
100226440 (SMARCA2)
GBAF(ncBAF) complex
100226440 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
100226440
NCBI-ProteinID:
XP_030114674
Ensembl:
ENSTGUG00000005460
LinkDB
All DBs
Position
Z:66277946..66394332
Genome browser
AA seq
1562 aa
AA seq
DB search
MSTPTDPGTMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYIS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGTAAGP
GAAPGMPGHTTAITPKTWTEGQAPDMNVSNAQQKLPAPAPSGRPSPAPAATQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENVSF
VQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagatcctggcaccatgcctcatcctggtccttcccctggaccagga
ccttcgcctggaccgattctgggacctagcccaggaccagggccgtctcctggttccgtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccacatccaatgccaacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatttct
ccacacccatctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatagcaggagacccacaa
gttatgaatcagcctaacagagggccttcccccttcagccctgcacagttgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttaccagagaacctc
cagcttgctgtccagggcaagagaacactgcctggtattcaacagcagcagcctcccagt
gccttcaacaggcagtctggtattggattacatgcaatgagtggtactgctgctggacca
ggggctgcaccagggatgcctggacatacaactgccattacccctaaaacatggactgaa
ggccaagccccagatatgaacgtctccaatgcacagcaaaagcttccagcgccagctcct
agtgggaggccttctcctgctcctgctgccacccagcctgctgccaccatgcctgggccc
tctgtaccacagcccccacctggacagccttcacccattgtccagctgcagcagaagcag
aaccgcatcagccctatccagaagccacaaggactggatcctgttgaaatactccaagaa
cgtgaatatagacttcaggctcgaattgctcacagaatccaggaactggagaatttgcct
ggttctctgccccctgatctgcggaccaaagctacagtggaattgaaggcacttaggtta
ctgaatttccaacgccagttaagacaagaggtagtagcctgcatgcgtcgtgacacaaca
ctggagacggcactgaactccaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagagcaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggccgaagatgaagaaggctaccgtaagctgattgatcaaaagaaagacagacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcccgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagttactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagagacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaggatgcaaagcaaatcattgagacagccaaacaagat
gtagatgatgaatatagcatgcaatatagtgccagagggtctcagtcctactacactgtt
gctcatgctatcactgaaagggtggaaaagcagtcttccctgcttattaacggcacatta
aaacattatcagctccagggactggagtggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacaaactattgctctcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttacgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaatcctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agttgcagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagggtg
gatttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggcca
ttcttgctgagaagactgaagaaggaggttgagtctcagctgccagaaaaggtggaatat
gtgatcaagtgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatcctgctcacggatggttctgaaaaagacaagaagggaaaaggcggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtccttcgctgaacatctgggctactcaaatggtgtcattaatggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttaagagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctggatcacagtactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttt
gatagtgactggaatcctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaatgaagttagagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgcggcaaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcattcctccaagctatactggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggatatggatcgtcgcagagaggat
gccagaaaccctaaacgtaaacctcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaggaagagaaaatattt
ggaagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaagagacgaagaaacgtggataaggactctgggaaggaggatggagaaaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaatccacccaaactgaca
aaacaaatgaatgccatcattgatactgtgataaactacaaggacagttcaggacggcag
ctaagtgaagtattcatacagctgccatctaggaaagaactaccagagtattatgaattg
attaggaaaccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgctgctgtgtcacaatgcacagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaggaagaagaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgagagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgtaagtttt
gttcagtga
DBGET
integrated database retrieval system
