Taeniopygia guttata (zebra finch): 100226475
Help
Entry
100226475 CDS
T01082
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100226475 (CHD2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100226475 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
100226475
NCBI-ProteinID:
XP_030137384
Ensembl:
ENSTGUG00000008540
LinkDB
All DBs
Position
10:14487698..14573059
Genome browser
AA seq
1829 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRRQKQLKRKIKWKREVSAGEEDEDGGEQGTSGESEPEPKKIKARRPVQR
RTVAKTGVKKPHKIQRGKRKKQDSSEEDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYVTEANGNPSADFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKSSSNDPEYLCKWMGLPY
AECSWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENL
ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL
STLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKD
KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMS
ALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLET
LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIK
GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNP
FNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFK
VANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPAEGKG
PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVDW
GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLL
KKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKED
GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKDKKEKPKGGEAKSGSKGKRS
QGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEH
TRNCLLKIGDRISECLKAYNDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDMSNMKKQFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHP
RDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSR
GDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNYHQQ
DFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPSHPAVSDPRSPPSQKSPHDS
KSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagtgag
cagggcagcgagtcaaacagcagctccgagtcctctgagagtcagtctgaatccgaaagt
gaatcaacgggttccaaatcccagcagacccctcctgaaaccaaagaaaaaccagcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggca
agtagtgaatctgaaaatgagagcccaaaaagaagacgccagaagcagttgaaaagaaaa
attaaatggaaaagagaggtctctgctggagaagaggatgaagatggaggggagcaaggc
accagtggagagagtgagcctgagccgaagaaaattaaagcaaggagacctgtccagagg
agaacagtggccaaaactggtgttaaaaagccccacaaaatccagcgtgggaagaggaag
aaacaagactcatctgaagaagatgatgatgacgaagacgatgagacccccaagagacaa
acccggcgaagagcagccaaaaatgtcagctacaaagaggatgacgattttgagacggat
tctgatgacctgatagagatgactggggaaggagctgatgaacaacaagacaacagtgaa
actattgagaaagtcttggacatcaggcttggaaaaaagggagccattggagcttccacc
acagtgtacgtgaccgaggccaatggcaaccccagcgccgactttgaccccgagaaggac
gagggggaggttcagtacctgatcaaatggaagggctggtcatacatccacagcacgtgg
gagagcgaggagtccttgcagcagcagaaagtgaagggcctgaaaaagctagaaaacttc
aagaaaaaagaggaggagatcaagcaatggctgggcaaggtctcacctgaagatgtagaa
tatttcaactgccaacaagagctggcttcagagctaaacaaacagtatcaaatagtggag
agggtaatagctgtgaagaccagcaagtctgccacaggacattcagatttcccagcaaac
agtcgcaaatcatcctcaaatgaccccgaatacctgtgcaagtggatggggctgccctat
gctgagtgcagctgggaggatgaggctctgatcagcaagaaatttcagcactgcattgac
agcttcaacagcaggaacaactccaagacaattcccacccgtgactgcaaggtgttgaag
cagaggccgaggtttgttgccttgaagaagcagccctcgtacatcggcggggagaacctg
gagctgagggattaccagctggagggcctcaactggctcgctcactcctggtgcaagaac
aacagtgtgatcctggctgatgaaatgggactgggcaagaccattcagacaatatcattc
ctgtcctacctgttccatcagcaccagctgtatggccctttcctggtggtcgtgcccctg
tccaccctcacctcctggcagagggagtttgaagtgtgggcacccgagataaacgtggtg
gtttacattggagacctcatgagcaggaacatgatacgtgaatatgaatggatccattct
cagtctaaaagattgaaattcaatgcacttatcacaacttacgagatcctcctgaaggat
aagactgttttgggaagcattaactgggcctttctcggcgtggacgaagcccatcggttg
aagaatgacgactccttgctgtacaaaaccttgattgatttcaagtccaaccacaggctg
ctgatcactggcaccccgcttcaaaactcactcaaggagctctggtccctgctgcacttc
atcatgccagagaagtttgagttctgggaggattttgaggaggatcacgggaaaggcaga
gagaatggctaccagagccttcacaaagtcctggagccgttcctgctgcgcagagtgaag
aaggatgtggagaaatctttgccagccaaagtggagcagatcctccgggtggaaatgtct
gctctgcagaagcagtactacaagtggattttgacaagaaactacaaagctctttcaaag
ggaacaaggggaagcacatctggtttcctgaatattgtaatggaattgaaaaagtgctgc
aaccattgctaccttatcaaacctcccgaggaaaatgagagagaaaatggccttgagacc
ctgcagtctttgatcaggagcagtggaaagctgattctcttggacaagctgctgaccagg
ctgcgggagagaggcaacagagtgctgatcttctcccagatggtgaggatgctggacatc
ttggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcgatcaag
ggggagatccgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttttgt
ttcttgttgtcaacaagagctggagggttgggaattaatttggcctctgctgatactgtt
gttatctttgactcggactggaacccccaaaatgatcttcaggctcaagcccgagctcat
cggattggacaaaagaagcaggtgaatatttaccgcctggtcacaaaggggacagtggag
gaggagatcattgagagagccaagaagaaaatggtgctggatcatttggttatccagcgt
atggacaccactggccggactgttctggacaacaactctgggagatccaactcaaatccc
ttcaacaaagaggagctgacagctattttgaagtttggagctgaagatcttttcaaggag
cttgaaggggaagagtcagagcctcaggagatggacatcgatgagattctgcgtctggct
gaaacacgggagaatgaggtgtccaccagtgccaccgacgagctgctctcccagttcaag
gttgccaactttgcaaccatggaggaggaagagacagagctggatgagcggtcccagaag
gattgggatgatatcattccagaagagcagaggaaaaaggtggaggaggaagaaaggcag
aaagaattggaagaaatctacatgctgcctcgaatccggagctcaacgaaaaaggctcag
acaaatgacagtgaatccgatgcagagaccaagagaaggctgcagagatcatcggggtca
gaaagcgagactgacgataccgacgacgagaagagaccgaagcgcaggggacgccctcgg
agcgttagaaaagacactgtggaaggatttactgatgctgaaatcaggaggtttatcaag
gcttacaagaagtttggattgcctcttgaacggctggagtgcattgcccgggatgctgag
ctggtggataagtctgtggctgacctgaagcgcttaggggagctcatccacaacagctgt
gtgtcagcaatgcaggaatatgaggagcagctgaaggaaaatccagcagaagggaaggga
cctggaaagagacgaggtcctaccatcaagatttctggtgtccaagtcaatgtgaaatcc
atcatccagcacgaagaggagtttgaaatgctgcacaaatccattccctcggacccagag
gaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgctcattttgatgtagactgg
ggagtggaggaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgg
gagctcattaaaacagatccagagctgaagttatctgataagatcctaccggttgagaca
gataagaaacctcagggaaaacagctccagacccgagttgattatctactgaaactgctg
aaaaaagatctggacaagaaagaaaacatgaaagatggggaagagggcaagctaaagaag
aggaaaccacgagtgaagaaagagaacaaggctcccaaagtcaaagatgaacatgggaat
gaactctcctctcctcggcactcagacaaccagtcagaagaaggggaagtcaaggaggat
ggcttggacaagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaacaag
gaaaaacagacatcctctaagaaagaaaaggaaagcgataaagagaaaaagaagacaaaa
gacaagaaagagaagcctaaaggtggcgaggccaaatctggaagtaaagggaagagatca
caaggtcctgtccacatcactgcagggagcgagccaatccccattggagaagatgaggat
gatgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtaaaaaaa
gcactgaagcaacttgataagcctgacaagggactgacagttcaagaacagctggagcac
acacgcaactgcctgctaaaaatcggtgatcgcatctctgagtgccttaaagcctacaat
gaccaggatcacatcaagctatggagaaggaacctatggatatttgtgtcaaaattcaca
gaatttgatgccagaaaactacacaaactctacaagatggctcataagaaaagatcacag
gaagaggaggagcagaagaagaaggaggacatgtccaacatgaagaagcagttccgccca
gagccttcgggctccagccgcgattccgtgatgtcccagtcccacgtgcctcacaatccc
cattcccagaagatccacatgcccccttcccacacccagcagcagatgcacgggcacccc
cgggacaactacggccatccaaacaagagacatttcagcaacacagaccgaggagactgg
cagagggatcgaaagttcaactacggcggcaacagcaaccagatgtggggcggggagcgg
caccaccagtacgagcagcactggtacaaggaccaccactacggggaccggcggtcgcgg
ggggatccccaccggagctccggcaactacagaccaaacaacctgtcccgcaagcggccc
tacgagcagtacaacagcgaccgcgaccacaggggccaccgcgactactacgacaggcac
caccacgattccaaacgccgacggtccgacgacttcaggcctcagaactaccaccagcag
gatttccggcggatgtctgaccacaggccgcccatgggataccatggccagggaccttcg
gaccactaccggtccttccacacagacaaactgggggattacaaacagcccctccctcca
tcgcaccctgccgtgtcggaccctcgctcgcccccctctcagaaatccccccacgattcc
aagtcacctcttgatcacaggtcacctctggataggtcattggaacagaaaaacaatcca
gattataactggaacattcggaaagcgtaa
DBGET
integrated database retrieval system
