Taeniopygia guttata (zebra finch): 100226489
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Entry
100226489 CDS
T01082
Symbol
BOC
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100226489 (BOC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
100226489 (BOC)
Cell adhesion molecules [BR:
tgu04515
]
Immunoglobulin superfamily
Other
100226489 (BOC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
ISET-FN3_linker
Pur_ac_phosph_N
V-set
C2-set_2
Ig_4
Ig_5
C1-set
Y_Y_Y
Fn3_VIN3
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
100226489
NCBI-ProteinID:
XP_030121498
LinkDB
All DBs
Position
1:20561084..20615105
Genome browser
AA seq
1107 aa
AA seq
DB search
MAMTRGRKRPMSPIPCLVLAAASCFAKLSESLQVTVQPASIVQKLGGPVSLGCVVDPPRV
NLTWRLNGKELAGSDEVLGIHVERGKLIIMALNNRTVGRYQCIARVPEGVIASVPAVVTL
ANLKDFKFNGQHVIEVDEGNTAVIACDLPESHPKAQVRYSVKQEWLEASRDNYLIMPSGN
LQIVNASQEDEGTYKCAAYNPVTQEVKTSVSSERLRVRRSTAEAARIIYPPEAQTIIVTK
GQSLILECVASGIPPPRVTWAKDGSGVSAYNKTRFLLSNLLIDPTSEEDSGTYSCTADNG
VGEAGAAFIFYNVQVFEPPEVTMELSQQIIPWGQSAKFTCKVRGNPQPSVVWLRNAVPLS
GSRRLRLSRRALRLLSVGPEDEGIYQCMAENEVGSAQAMVQLRTARPGAPLNPGQDVQLH
TAQSPTPPSRNSTLKLPLDKAGLPKPGTTPPLAASPQCAANKELVPPAEAPIILSSPRTS
KTDSYDLVWRPRPDSRAPILYYVVKHRKQVTNASDSWTVRDVPASQHRLTLTRLDPGSLY
EVEMAAHNCAGEGQTAMVTFRTGRRPKPEIVASKEQQIQRDDPGTSTQSSNQADNSRLSP
PEAPDRPTISMASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKLGDWVLATSDIPPSRLS
VEIPGLEKGTSYKFRVRALNILGESEPSAASRPYVVSGYSSRVYERPVAGPYITFTDAIN
ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDVVEGDRYWHSISHLQPETS
YDIKMQCFNEGGESEFSNVMICETKARKSLGLPGRLPPSKVPPQQHPPLNGGHSGLGTGA
MVARSSDLPYLIVGVVLGSIVLLIVAFIPFCLWRAWSKQKQTIDMSFPGAGLLVSSCQYT
MVPLRGISAPRANGHPFINGQPYASRAHLNGICTSAGVGYTSTKPRDYSPDEMPQSQEET
KALLQARVLQNGSAQQDYQPSRLPSSRTEDSSFLYSLPDDSTHQLLQPQDDCPHLQEHFV
GLHHPVMGSKVGGPSLDARRDTLLHQGSPCCLGLVPVEEVERLDCCQSRGDLHAQNPVIT
SLGQDLPRHLNSSPPPLRPLETHPPTS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgacacgtggaaggaagaggcccatgtcccccatcccttgcctcgtgcttgcg
gctgccagctgttttgccaaactgagtgaatcactgcaggtcacagtgcaacctgcttct
attgtccaaaaacttggaggcccagtcagcctgggctgtgtggtagaccccccccgagtg
aacctcacctggagactgaacgggaaggagctggctggatcagacgaggtgctgggcatc
catgtggagcgagggaagctcatcatcatggctctcaacaaccgcaccgtggggcgctac
cagtgcatcgctcgtgtgcctgaaggagtcattgccagtgtccctgcagtggtcacccta
gctaatctcaaagatttcaagttcaatggccagcatgtgatcgaggtggatgaagggaac
acagccgtgattgcctgcgacctacccgaaagtcaccccaaggctcaggtccgctacagt
gtgaagcaggagtggctggaggcttcccgagacaattatcttattatgccatctggaaac
cttcagatcgttaatgccagccaggaggatgaggggacttacaaatgtgctgcctacaac
cctgtgacacaggaggtgaaaacttcagtctccagtgagaggctccgtgtgagacgctcc
acagcagaggcagcccggataatctaccctcctgaggctcagaccatcattgtcaccaag
ggccagagcctcattctggagtgtgtggccagcgggatccccccgccgcgggtcacctgg
gctaaggatggctccggcgtctccgcctacaacaagacgcgcttcctgctcagcaacctc
ctgatcgaccccacgagcgaggaggactcaggcacctacagctgcacggctgacaatggc
gttggggaggccggggctgccttcatcttctacaacgtgcaggtgtttgaacccccggag
gtcaccatggagctgtcccagcagatcattccctggggccagagcgccaagttcacgtgc
aaggtgcgcgggaacccgcagccctcggtggtgtggctgcgcaacgcggtgccgctgtca
ggcagccggcggctgcggctgtcgcgccgggcgctgcggctgctcagcgtggggcccgag
gacgagggcatctaccagtgcatggccgagaacgaggtgggcagcgcccaagccatggtg
cagctgaggacagcccgcccgggagctccactcaaccccgggcaagatgtccagctgcac
acggctcagtctccaacaccaccttccaggaacagcaccttaaagctgcccttggataaa
gctggactgcccaagcctgggacaacccctcctctagcagcatctccacagtgtgcagcc
aacaaggagctggtgcctccagctgaagcccccatcatcctcagttctccacggacctcc
aagacagacagctacgacctggtgtggagaccccggcctgacagcagagcccccatcctc
tattacgtggtgaagcatcgcaagcaggtcaccaacgcctcagacagctggactgtgagg
gatgtcccagcctcgcagcaccgcctgaccctcactaggctggaccctgggagcctctat
gaggtggagatggctgctcacaactgcgccggcgagggacagacggccatggtgaccttc
cgcaccgggcggcgcccaaagccagagatagttgccagcaaagagcagcagatccagagg
gatgacccaggcacgagcactcagagcagtaaccaggccgacaacagccgtctgtcccct
cctgaggcaccagaccgtccaaccatctccatggcctcagagacatctgtgtacgtgacc
tggatcccccgtgggaatggcgggttccccatccagtctttccgtgtggagtataagaaa
ttgaagaagttgggagactgggtcctggccactagtgatattcctccctctcgcctctct
gtggaaatcccaggcctggagaaaggcacatcgtataagttccgtgtgcgggcgctgaac
atcctgggagagagcgagcccagtgcggcgtcccggccatacgtggtgtcggggtacagc
agccgtgtctacgagcgccccgtggctgggccctacatcaccttcacagacgccatcaac
gagaccaccatcatgctcaagtggatgtacatcccagccagcaataacaacacccccatc
catggattttacatctactaccgccccactgacagtgataatgacagtgactacaagaag
gacgtggtggaaggagatcggtactggcactccatcagccacctgcagccagagacctca
tatgacattaagatgcagtgcttcaacgagggaggtgaaagcgagttcagcaacgtgatg
atctgtgaaaccaaagctcggaagtctcttggtctgccaggtcgtcttccaccctccaaa
gtgccccctcagcagcatcctccactcaatggtgggcacagtggcctggggacaggagcc
atggtggcccgttccagcgacttgccgtacttgattgtaggcgttgtgctgggatccatt
gtactcctcatcgtggctttcatccccttttgcctttggagagcttggtccaagcagaag
caaaccattgacatgagcttcccaggagctgggctgctggtgtcatcctgccagtacacc
atggtacctctgagaggcatctctgctcctcgtgccaatggacatccctttattaatggg
cagccctatgccagcagggcacatctgaatggcatctgcacctctgcaggagtggggtac
acaagcaccaagccccgagattacagccctgatgaaatgccacagtcacaggaagagacc
aaggccttgctgcaggcaagagtgctgcagaatgggagtgcccagcaagactaccagccc
tccagattgcccagctccagaacagaagacagctctttcctctacagtctcccagatgac
tccactcaccagcttcttcagccacaagatgactgtcctcatcttcaagagcactttgtt
ggcctccatcatcctgtgatgggaagcaaagtgggaggccctagcctggatgctcgacgg
gataccctcctccaccaaggaagcccttgctgcttaggcctagtgccagttgaagaggta
gaaagactagactgctgccagtccagaggagatctccatgcccagaatccggtgatcaca
tctttgggtcaggacctaccaagacatctgaacagcagccctccaccactgagaccctta
gagactcatcctcccaccagctag
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