Taeniopygia guttata (zebra finch): 100226510
Help
Entry
100226510 CDS
T01082
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
tgu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100226510 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100226510 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100226510 (NUP98)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100226510 (NUP98)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100226510 (NUP98)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100226510 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100226510
NCBI-ProteinID:
XP_030140535
Ensembl:
ENSTGUG00000000556
UniProt:
H0YQL8
LinkDB
All DBs
Position
1:114005981..114040359
Genome browser
AA seq
1795 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSSNNTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRPDGEREEEEEAHEVTRFYTNPIAKPIPQSLE
GSGHKSHSSVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQEEWDKEVEPGAQLHPAGI
VLTRAGYYTIPTLEELARLTNDRKECIVTDFTIGRTGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDEKKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMDYEGRLEA
ASRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHALKVDTKKLKTTPVPPPGH
LPPQQMALNGKPAPPAQPPELEQLGRAVELDSDMADVTQEPAQEPLAEDALAEEQEAVPA
STHIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVKMDASQEICSPRLPISKSQ
GQKRHSAAGLLQSKFASVLLQAPSAAVADAKGPRTLGSPPSAALWSAASPLAPAFAVPAA
LPEVQVKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLANCGDQL
SGSSEMEDAQLEPLEYGFLPTPVAPKSLTESPFKVHVEKLSLAQWKMDRDKELYLTPLEI
KLKHSTVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPTMAETAVKHWCLAWTLCEALW
GKLKELEASLEEPSEYVLALERRRAFSRWLSETAAARIEDEVALSRHGSHVEAVFSCLTG
KRIGEACRLAQQAGDHRLALLLSQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFA
LLAGKPVWQLSERISVNVCSLLDWKRCVAVHLWYLLPPTASISKALAMYESAFQNTSECE
KYACCPLPPYLENSGYVIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPL
DFRLSWHLWEVLRALNYCHLSQQSWGVLNTSYAAQLESEGLWEWAVFVMLHEPDTHVREK
AVRELLSRHCALAESPESWAKETFLTQRLCVPPRWIHEAKAVRARMKGDKHKEALFLFKA
GHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSTLIQDWELAGLVYLDYIRVN
EMLDRIQQLDVSTYELERLHTKVTSLCNRIDQLQCHSAKDRLAQSDMAKRLANVLRVVLS
LQQGPEAGPEPAEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccattcggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgctggctttgggacgaccagcggaggggccttcgggacctcggcc
ttcggctccagcaacaacacgggcagcctgttcgggagcacgcagacaaagccaggaggg
ctgtttgggtccaccacgttcaaccaaccagccacctcctccaccagcactggctttggc
tttggaacatccactggcacatccaacagcctctttggaaccaccagcactggtggaagc
ctcttctcatcccagagtaatgcctttgcccagaacaaaccagctggttttggaaacttc
ggtacgagcaccagcagtggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagctttactgctgctccaactggcacg
actataaaatttaatcccccaaccggcaccgacaccatggtgaagtccggcgtcagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctc
gaggaactccgtttggaagactaccaggcaaataggaaagggcccacgaatcctgtagga
gcaggagcaactgctggcttgtttggctcttccactgccacgtccagcacagccacagga
ctgtttggctcttccactaccaatacaggcttctcctatggacagaataaaactgctttt
ggaaccagtacgaccggctttggcacgggcaccaccggggggctctttgggcagcagtcc
cagaccacgagtctgttcaacaaacccttcggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcactctgggccagcccaacaccagcaccatgggtctcttt
ggggtcacccagccctcgcagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacgggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccctcgttcggtaccaccacgggcgggggcctctttggttttggtgccaacactgctgga
aatagcttgtttggaaataagcctgcgactgggactctgggcactggacttggaacaggg
tttggaacagctctgggggcaggacagacgtccttgtttggaaacacgcagccgaagctg
gggggaacgctgggaacgggggccttcggagccccaggattcaacacatccacagccacc
ctgggcttcggggcccctcagccggctgtagctctgacagaccccaacgcctctgcagcc
cagcaagctgtcctgcagcagcacctcaacagcctgacctactcaccctttggagactcc
cctctcttcagaaaccccatgtcagacccgaagaagaaggaagagaggctgaagccaacc
aacccagcagcccagaaggccctgacgacccccacccactacaagctgaccccacgcccc
gcgaccagagtgcggcccaaggccctgcagtcggcgggctcggccaagtcccagctcttt
gatgggctggatgatgatgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcagcagcagcaacctgttctcccccgtgagccga
gagaatgaggacctggcgtcgccgtcggagtacccagagaatggggacaggttcttcctg
tcggtgcctcccgaggagaaccacaggccggatggggagcgggaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaaccccatagccaagcccatcccgcagagcctggag
ggcagcgggcacaagtcccactcgagcgtggacgacaccatcgtggcgctgaacatgcgc
gcggcgctgcgcaacgggctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggaggagtgggacaaggaggtcgagcctggggcccagctgcatcctgcagggatt
gtcctgacacgagctggctactacaccatcccgaccctggaggagctggcccggctgacc
aacgacaggaaagaatgtatcgtgacagacttcaccatcggccgcacgggttatggatcg
atttacttcgaaggagaagtaaatctaacaaacctaaacctggatgagattgtacatatc
cggagaaaagaagttattgtttaccctgacgatgaaaaaaagcctcccattggggaaggg
ttaaacaggcgggccgaggtgaccctggacggcgtgtggcccacggacaagacgtcgcgg
tgcctgatcaagagccccgagcggctggcggagatggactacgagggccggctggaggcc
gcgtcccgcaagcagggcgcgcgcttcaaggagtaccgccccgagaccggctcctgggtc
ttcaaggtagcacacttttccaagtatggcttgcaagactctgatgaggaagaggaagat
catgctttgaaagtggacaccaagaagttaaagaccacacctgtgccacccccagggcac
ctgccaccccagcagatggccctgaacggcaagccagcgcccccggctcagcccccggag
ctggagcagctgggcagggcggtggagctggacagtgacatggcagacgtcacccaggag
ccagcccaggagcccttggcagaggacgccctggccgaggagcaggaggcagtgccagcg
tccacgcacatcgcgtccacccagggcatcaacccctacgtcctgcagatcatgaaagct
tccctgcttgctgatgatgacgacctggatttgatcctggattatcctgggaagcagcct
gtcaagatggatgcttcccaagagatctgctccccaaggcttcctatttcaaagtcacaa
ggacagaagagacattcagctgctgggctgctgcagtccaagtttgccagcgtccttctg
caagcaccgagcgctgctgtggcagatgccaagggcccgaggactttgggcagtccccct
tcggccgcgctctggtcggcggcgtccccgctggccccggcgttcgcggtgcccgcggcg
ctgcccgaggtgcaggtgaagacggtgggggcgcgcaggcagcgcgggctcgtcccgctg
gagaggtccatcacctacgggaaagggaagctcctgatggacatgggactcttcatgggc
cgctccttccgtgttggctggggacccaactggacgctggccaattgtggggatcagttg
agtggctcaagtgaaatggaagatgctcagttggagcccttggaatacggattcctgccg
actcctgtggctcccaaatcactcacagaatcccctttcaaagttcatgtggaaaagttg
agcttggcgcaatggaagatggacagagacaaggagctgtatctcacccctctggagata
aagctgaagcacagcactgtccacatggatgagccctgtcctctcctggcccccaacccc
ggagtctctgctatccatgactatgctgactgggccaggaaagcatctgaagaccccact
atggcagagaccgctgtgaagcactggtgcttggcctggacgttgtgtgaggccctctgg
ggcaagctgaaggagctggaggccagcctggaggagcccagcgagtacgtgctggcgctg
gagcgccgccgggccttctcgcggtggctgtcggagacggcggccgcgcgcatcgaggac
gaggtggccctgtcccggcacggcagccacgtcgaggccgtgttcagctgcctcacgggc
aagaggatcggcgaggcctgcaggctggcgcagcaggcaggtgaccaccgtctggcgctg
ctgctgtcgcagctggccggcagccagcccgtgcgggacctgctgaccctgcagctggtg
gactggcaccgcctgcacagcgaccgcttcatccaggaggagcggctgcgcctcttcgcc
ctgctcgcgggcaagccggtgtggcagctctccgagaggatcagtgtcaacgtgtgctcg
ctgctggactggaagcgctgcgtggccgtgcacctctggtacctgctgccccccaccgcc
tccatctccaaggctctggccatgtacgagtccgcctttcagaacacctcagagtgtgaa
aaatacgcctgctgtcctctgcctccttacctggaaaattctgggtatgtcattgaggaa
gatgacaatggtggaaggcccctgagagatgtctgcttccatttgttaaagctctacagt
gacaggtcctatgagcttgaccagctgctggatcccaggagtgtcacctctgacccgctg
gatttccgcctcagctggcacctgtgggaggtgctccgggccctgaactactgccacctg
tcccagcagagctggggggtgctcaacaccagttatgctgcccagctggagagcgagggg
ctgtgggaatgggctgtgttcgtgatgctgcacgagcctgacacgcatgtccgggagaag
gccgtgcgggagctgctgagccggcactgcgccctggccgagagccccgagtcctgggcc
aaggagaccttcctgacacagcgcctctgcgtccccccgcgctggatccacgaggccaag
gcggtccgggccaggatgaagggtgacaagcacaaagaggcgcttttcctcttcaaggct
gggcactggaaccagtgccacaagctggttgtcaggcacttggcctcagatgcaattatc
aatgagaactacaagtacctgaaaggattcctggaggacctggcgcctccggagcgcagc
acgctcatccaggactgggagctggcagggctggtctacctcgactacatccgtgtcaac
gagatgctggacaggattcagcagctggatgtttccacctacgagctggagcggttacac
accaaagtgacgtccctgtgcaacaggatagatcagctgcagtgccactcggccaaggac
cgcctggctcagtcagacatggcgaagcgcctggccaacgtgctgcgggtggtgctgagc
ctgcagcagggccccgaggcgggccccgagcccgcggagccgcgcgtgcccctgcggctg
ctggccccgcacatcggccgcctgcccatgcccgaggactacgcgctggaggagctgcgc
ggcctcacccaggcctacctgcgggagctggccctggccgcgcactga
DBGET
integrated database retrieval system
