Taeniopygia guttata (zebra finch): 100226541
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Entry
100226541 CDS
T01082
Symbol
NSMCE2
Name
(RefSeq) LOW QUALITY PROTEIN: E3 SUMO-protein ligase NSE2
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100226541 (NSMCE2)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100226541 (NSMCE2)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100226541 (NSMCE2)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100226541 (NSMCE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
Rtf2
DUF5962
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100226541
NCBI-ProteinID:
XP_012427570
Ensembl:
ENSTGUG00000012507
LinkDB
All DBs
Position
2:141535211..141661348
Genome browser
AA seq
308 aa
AA seq
DB search
MDGGCESREGGGGAPYDXAEPSHHMTAPADEAVPPAPVPGAAARLRLLRGGRRGAAPGTA
ALPGCGDESNNFKMSDGPRVSFSAIDSALSSLKNCQSFIKSGMDVTTQVALDLVESFNDE
EEVNNMEKVMLEYATMDRKLSHYIKAFEETINQVKREKPENLPDLENLAREKFLEMESMN
SDSDLQQNEKYMYFKDQLKEMKKQYHGTDTIEQIDEDIAVTRSQMNFICPITQVTMKRPV
RNKVCGHIYEEDAILEMIQTQKQKKKKVRCPKMGCSHVDVKGSDLVRDEIFKRLIDSQKK
QSWSTLDT
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacggagggtgcgaatcacgggagggaggcggcggcgctccctatgacngtgccgag
ccctcccatcacatgacggcgccggctgatgaggcagttccgcccgccccggtgcccggc
gctgccgcccgcctgcggttactgcggggagggaggcgcggggccgcccccggaacagcg
gcgctgccgggctgcggggacgagagtaacaatttcaagatgtcagatggtccaagagtc
tcgttcagtgcaattgattccgctctttcttctttgaaaaactgccagtccttcatcaag
tccgggatggatgtgactactcaggttgcccttgaccttgtggaaagtttcaatgatgaa
gaagaagttaacaatatggaaaaagtcatgttagaatatgctacaatggacagaaaactt
agtcattatataaaagcatttgaagaaaccataaatcaggtaaaacgagaaaaaccagaa
aatttaccagatttagaaaacttggcccgagaaaaattccttgaaatggagagcatgaac
agtgactcagatttacaacagaatgaaaaatatatgtattttaaggatcaacttaaagag
atgaaaaaacaatatcatggtactgacaccattgaacaaattgatgaagatatagccgtg
actcgaagtcagatgaactttatttgtcccattacacaggtgacaatgaagaggccagtg
cggaacaaagtctgtggacatatttatgaagaagatgccatcctagaaatgatccagact
cagaagcagaaaaagaagaaagtccgatgccctaaaatgggctgtagccatgttgatgta
aaaggatcagatcttgtacgagatgaaatatttaaaagactgattgacagtcagaaaaaa
caaagctggtcaacactggacacgtga
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