Taeniopygia guttata (zebra finch): 100226723
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Entry
100226723 CDS
T01082
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
100226723
Cell adhesion molecules [BR:
tgu04515
]
Cadherins
Protocadherins
100226723
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100226723
NCBI-ProteinID:
XP_030139512
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Position
13:7555979..7559901
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AA seq
813 aa
AA seq
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MALARQVLCLSAFLSLPLARAEPIRYSVAEEAESGSLVGKLAEDAGLTPAQLSARRARLV
SEDGRQHFRFERASGRLVVAGRLDREELCGQAATCMLPFELLLSSPLQFFRVEVTLDDIN
DHSPVFPEERVTFKIPETSEPGSCFPMEAAQDLDIGSNTVQEYSISPENEYFRVSYGSRI
TGKKSLELVLEKPLDREEHAEMGFSVIALDGGSPPRSGTTHVKIFILDVNDNAPIFTQEE
YIAQVLENMPEGSVVLTVLATDQDAGVNGDITYQLSQAVGKSDSAFLIDPITGAIKLTKP
LDFEAAESHEMSVRATDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPIPENTVPGTVV
ALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYELVTVSALDREETPQYILSVTAAD
AGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVHENNVPTVFVGAVSAGDADVGLNAK
VTYSLAPEQGAERPSCSCISVNSENGHVFVLRPLDYEHLRQTEVTVSACDAGSPPLRANV
TVRLVVLDENDNAPLVLYPAQDGSPASSELVPVWAEAGYLIGKVVAVDADSGQNSWLSYH
LLRATDPGLFSVAVQSGEVRLRRPVTERDSVKQKLVVLVRDNGKPPLSATAALSALLLKD
FSDVRLPHSSPAPEDQDGSLTTYLIISLVFVSLLFLISSAVFVARKACRRKELEAGHVLY
GADNLQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLRPILPSLPPQHCALGQGPDE
EQDFPCVPVSTEDMAPDNAGTLTAGQFNALSFD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcaaggcaagtgctttgtctctctgctttcctctcgctgccgctcgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtgggcaag
ctggcggaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtc
tcggaggacggccggcagcattttcgcttcgagcgcgcctccggccgcctcgtcgtggcg
gggaggctggaccgggaggagctgtgcggccaggccgccacctgcatgctccccttcgag
ctgctgctctccagccccctgcagttctttcgggtcgaggtgactctggacgatatcaat
gaccattcacccgtctttcccgaggaacgagtcacttttaagattccagagacgagcgag
ccaggctcttgtttcccaatggaggctgctcaggacctcgatattggcagcaacacagtc
caggagtacagcatctctcccgagaacgagtattttcgtgtctcctatgggagtcgcatt
acaggcaagaagtctcttgaacttgttttggaaaagccattagacagagaggaacatgca
gagatgggtttcagtgttattgctctggatgggggctctcctcccaggagcggcaccacc
catgtgaaaatattcattctggatgtaaatgacaatgctcccatattcacacaggaggaa
tatattgcacaggtgctggagaacatgccagaaggctctgtggttctgactgtgctggca
actgatcaggatgcaggagttaatggggacatcacctatcaactcagccaggcagtgggc
aaaagtgactcagcatttttgattgatcccataactggtgcaattaaactcacaaaacct
ctggactttgaggcagcagaaagtcatgagatgagtgtgagggctacagatggaggggga
ctctcagccatctgcaaagtgttggtggaggtggtggatgtgaacgacaatgccccagag
ctggtggtcagttccttcagcagtcccatccccgagaacacagtgcctggcacggtggtt
gccctgttctcggtgagggaccgggattctggtgccaacgggaagatctcctgtgccctc
gaggatcagctctccttctccctgcggccagcctataagaattactatgagctggtgaca
gtgagcgcgctggaccgcgaggagacgcctcagtacatcctgagtgtcacggcagcagat
gcggggtcgcctcctctcaccagcacccagaccttcaccgtggacatctccgatgtcaat
gacaatgcccccgtcttcaaccagacctcctacaccatgtacgtgcatgagaacaacgtg
cccacggtgtttgttggggccgtcagtgctggggatgctgacgtggggctcaatgccaag
gtgacctattccctggcaccagagcaaggggcagagcggccctcgtgctcctgcatctcg
gtgaactctgagaacggacacgtgtttgtgctgcggcccctggactacgagcacttgagg
cagacggaggtgacggtcagtgcctgtgacgcgggctctcctcccctcagagccaacgtc
accgtccgcctggtcgtgctggacgagaatgacaacgctccgctcgtgctctacccggcc
caggacggcagcccagcgtccagcgagctggtgcccgtgtgggctgaggcgggctacctc
atcggcaaagtggtggccgtcgatgccgactcgggacagaactcctggctctcctaccac
ctgctgagggccaccgacccagggctgttttcggtggctgtccaaagcggggaggtgcgt
ctgaggaggccggtgacagagagagacagcgtgaagcagaagctggttgtcctggtcaga
gacaacggcaagcccccactgtcagccacggcagccctgagcgctctcctgctcaaggac
ttctcagacgtgcgcctcccgcacagcagcccggccccagaggatcaggacggctccctg
accacctatttaatcatttccttggtctttgtctcactgctcttcctcatctccagcgca
gtctttgtggctcgcaaggcgtgcaggagaaaggagctggaggctggccatgtgctctat
ggtgccgacaacttgcagagcggcctggccgatgcagccgctgcagggaccctgccccgc
gcctattgctacgagatcagcctcaccacgggctcgggcaacagcgagttcaaattcctc
aggcccatcctgcccagcctgcccccacagcactgcgccctgggccagggccccgatgag
gaacaggatttcccctgtgtccctgtcagcacagaggacatggccccagacaatgctggg
actctcactgcaggacagttcaacgccctttcttttgactag
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