Taeniopygia guttata (zebra finch): 100226791
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Entry
100226791 CDS
T01082
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04137
Mitophagy - animal
tgu04140
Autophagy - animal
tgu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100226791 (HIF1A)
04137 Mitophagy - animal
100226791 (HIF1A)
04148 Efferocytosis
100226791 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100226791 (HIF1A)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100226791 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
100226791
NCBI-ProteinID:
XP_030131020
Ensembl:
ENSTGUG00000012978
UniProt:
H0ZRX1
LinkDB
All DBs
Position
5:complement(55979758..56014019)
Genome browser
AA seq
811 aa
AA seq
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MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSGSPSAAPMPIFQQ
GQAAAGSTEEVKPAERAEDAKPIVVPSSPARGVPEPSSAPASPYGGSRSRTASPIRAGKA
TVDQVEKPSPGAPSLLTVTLNERSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG
SLFQQTGDRGGNASLAWKRVKGCKTNGHSGVEQKTIILLSTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccggcggcgtcaccgacaagaagaggattagctctgaacgcaggaaagag
aagtccagggatgcagcccggtgcaggaggagcaaggagtcggaagtgttctacgagctg
gcccaccagctgcccctgccccacacggtcagcgcacacctggacaaggcgtccatcatg
cggctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctggagaca
gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggctttgtc
atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagtgtattcgatttcactcatccatgtgac
cacgaggagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
caaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtgaatataaagtctgctacatggaaggtgctgcactgcactggccacatccgtgtg
tacgacacgtgtgggaaccagacccactgcgggtacaaaaagcctcccatgacctgcctg
gtgttgatctgtgaacctattcctcacccatcaaacattgaggtccccctggacagtaaa
acgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca
gagttgatggggtatgagccagaggagctcctgggtcgctcaatctatgagtactatcac
gcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaagggcaggtg
acaacaggacagtacagaatgctggccaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtgaactac
gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg
ctgaaaccagtggagtctcctgacatgaaaatgaccaaaatattcagtaaagatgacctg
gatgataccaacagcctatttgaaaaacttaaacaggaaccagatgctttaactgtgcta
gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataatgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagccactcgaactttcttttaccatgcctcaggtgcaagaacaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtccgaacgactactgctttgat
gtggataatgatatggccagtgaattcaaactggaattagtggagaaactctttgccata
gatacagaagcaaaaaatccattctctactcaggaaaccgatttagatttagagatgttg
gctccttacatcccgatggatgacgacttccagctgcgctccttcgaccagctgtccccg
ctggaaagcagcagctcctcgggctctccgagcgcagcccccatgcccatattccagcag
ggccaggcggcagcgggcagcaccgaggaggtgaagccggcggagcgcgcggaggacgcg
aagccgatcgttgtcccttcctcgcccgcgcgcggggtccccgagcccagcagtgccccc
gcctcgccctacggcgggagcaggagtcggactgcctctcccatcagggcagggaaagca
acagtggatcaggtggaaaagccttctccaggagcacccagcttgctaacagtcactctg
aatgaaagatctactgcactggatgaagaactaaatccaaagatgctagctttgcataat
gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggg
tctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgta
aagggatgcaaaacgaatggtcacagtggagtggagcaaaagacaatcattctactatca
actgacatagcaagtaaacttctagggcagtcgatggatgagagtggactcccccaactc
acgagttacgactgcgaagtaaacgctcccatacagggcaacagaaacctgctacagggg
gaagaactgctcagagctctggatcaagttaactga
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