Taeniopygia guttata (zebra finch): 100226820
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Entry
100226820 CDS
T01082
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04517
IgSF CAM signaling
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100226820
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100226820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100226820
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100226820
Intermediate filaments
Intermediate filament-binding proteins
100226820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
MG280
CH_2
Motif
Other DBs
NCBI-GeneID:
100226820
NCBI-ProteinID:
XP_032602134
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MSSSHHLHLPPSPVWAWFWFWFWFWFWWGGVGWQDLLRAGGPRVPQPKPTRGRMRIHSLE
NVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRS
AKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLIDFHKLTKSNATYNL
QQAFNTAEQHLGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVL
DQVLEIAAITARYEALAAELLAWIHHTITIITKQKFANSLTGVQQQLQAFTAFCTLEKPV
KFQEKGNLEVLLFTIQSKLRATNRKLYVPSEGKSISDINKAWSCLEKAEHEREVALRNEL
IRQEKLELLAQRFDHKATMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSY
QERIQVVVELALEMESEGYYDTRRIGAQKDNVLRQWALLTELLRARRARLEQNLALQKIF
QEMVYMIDWMEEMQVLLVSKDLGKHLLEVEDLLQKHGLLEADIAAQTERVQALNAAALKF
SELEGYQPCDPQIICNRVHHVQTCLEELEELAAKRRKELEDSRQLWTFFQEMEEAEAWIR
EKEKILAAKTCGRDLSSVVTLTNKHKTMLGELGNRRALLHQTMKKGEKILAKKSFSSVGI
QEKMREVCLRWKKLEEVTGLHQQRLEDAMNFFQFSAEMDDLVAWLQDTYRIVSSEDFGHD
DHSSQALLRKHRAVVEQVEKTRAAVLALRQHLALLAPDHRQGVDIQIRVVEVEQLYGEVA
EVAVLRTQWLQDALAVYRMFSEVHACEVWVDEKEQWLEKMEVPEELDEVEVIQHRFESLD
QEMNSVMGRVLDVNQVVQQLVDGGHPSSDEVRSCQDHLNSRWNRVVELVENKKSQLSSVL
KIQNFLLECSEMKEQVREKRRTIEATQSGGSDLGGVLALQRRLSTMEAALVALEPRLVEL
QQEGETLAAAHPDRALEILLPFEEIGHEWDNLKRALQGCEDTLTVAGRLQQFIQDLDNFL
GWLVKTQAAVGSEEVPESLAEAEKLLNVHVALKEEINGYEEDYAKIQAASELLALEDMEV
PHLSLQQWLQKLDAGWGKLLQSWDMRRELLVQSHVFHLFLRDVQQCQKLLCKQETALANA
ELPDTVEGVTKALKKHKDFTTTLELNLQKVQLVLQAGESLRRQGNLHSERVAEAMEELRA
RSEQSRGRAREWAERLQRQRDLERFRGACREVPTPPLITMESQVEEWSKEVGELQAQAAA
LPAQAAGRDAVGERQSAVGTRIVRLIEPLKERRRXLLASKEVHQVSHELEDEVMWVQDRL
PLAMLKDHGTNLQTVQQFIKKNQNLRREIQVHRPRVDEVLERAAAVASIRSPEAEAVRGL
LERLATMWAELQEKTERRQQALDATYQLEQYYFDVAEVEAWLGEQELLLMNEEKGKDEQS
TLHLLKKHLLTEQTIDNYEETIAQLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLKEL
VEERKVHLEQQYWLYQLSREVDELEHWIAEKEVVAGSPELGQDFEHVTLLQEKFLEFASE
TGSVGQERIAAVNQMVDELIDYGHRDAATIAEWKDGVNEAWADLLELMETRAQMLAASHE
LHKFFNDCKEVLGQIEEKRRRLPELAARDGRSSAGALQRALGAFQHDVELLVAQVRQLQE
GAAQLRTLYAGDNAEAIAGREQEVLRAWKELLAACEECRLHVASVAEKIRFVGAVRDLLA
WMDGVIQQMGAAEKPRDVSSVELLMNDHQSLKTEMEARAKNVATCLELGKTLILSKSPAA
DEIKSHMEKLLAKKKEMTEKWDKHWEWLQQMREVHQFAQEAVVADAWLTAQEPLLKSQEL
GSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKLKAEQNQQPPTPLLTRKFPGD
PAGGAGGADAPRPEPRVAYVRHELRPERLQPKLDRVQPPATAGGAEEPAPATAAEPVVAT
KAEEPNEVRPGPPERRRERRERRLERQESSEPEPPRHDGKSGGKATLADIVEQLQEKEAG
GPVPASPRDRDSPARLPAGPESLPERTPRPERPRARDRPKPRRRPRPRDSAQGPGEPRRS
RSAPAQGSAPPPPPPPTHTVTHEGFLLRKHELDGAGKKASNRSWVNLYCVLAKGDLGFYK
DAKGPAAGATHGGEPLLSLHRATAEVANDYKKKKNVFKLKTGDGSEFLLQAKDEEDMQGW
LRALAASAQEHAELARWHQGLLTTSSTDEGLPRRDPDRPRRK
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcccaccatctccatctcccaccatccccagtctgggcctggttctggttc
tggttctggttctggttctggtggggtggggtggggtggcaggaccttctccgagccgga
ggtccccgtgtcccccagcccaagccgacgcggggccggatgcggatccactccctggag
aacgtggacaaggccctgcagttcctcaaggagcagcgcgtccacctggagaacgtcggc
tcccacgacatcgtggacggcaaccaccgcctgaccctcggcctcatctggaccatcatc
ctgcgcttccagatccaggtgatcaagatcaagaccgaggacaaccgggagacgcgctcg
gccaaggacgcgctgctgctctggtgccagatgaagacggcgggctaccctgaggtcaac
atccagaacttcaccaccagctggagggacggcctggccttcaacgccctcatccaccgg
caccggccggatctcatcgacttccacaagttgaccaagtccaacgccacctacaacctc
cagcaggccttcaacacggccgagcagcacctggggctgagcaagctgctggaccccgaa
gacgtcaacatggaggaccccgacgagaagtccatcatcacctacgtggtgtccttctac
cactacttctccaagatgaaggcgctggcggtggaggggaagcgcatcgggaaggtgctg
gaccaggtgctggagatcgcggccatcacggcgcgctacgaggcgctggcggccgagctg
ctggcctggatccaccacaccatcaccatcatcaccaagcagaagttcgccaactcgctg
accggcgtccagcagcagctccaggccttcaccgccttctgcaccctggagaaaccggtc
aagttccaggagaaggggaacctcgaggtgctgctcttcaccatccagagcaaactccgg
gccaccaaccgcaagctctacgtgcccagcgagggcaagagcatctccgacatcaacaag
gcctggagctgcctggagaaggcggagcacgagcgggaggtggccctgaggaacgagctg
atccggcaggagaagctggagctgctggcccagcgcttcgaccacaaggccaccatgagg
gagacgtggctcaacgagaaccagcgcctggtctcgcaggacaacttcggctacgacctg
ccggcggtggaggcggccatgaagaagcacgaggccatcgaggccgacatctcctcgtac
caggagcgcatccaggtggtggtggagctggccctggagatggagtccgagggctactac
gacacgcggcgcatcggcgcccagaaggacaacgtcctgcggcagtgggcgctgctgacc
gagctgctccgcgcccgccgcgcccgcctcgagcagaacctggcgctgcagaagatcttc
caggagatggtctacatgatcgactggatggaggagatgcaggttcttctggtctccaag
gatttggggaagcatctgctggaggttgaggacctcctgcagaagcacgggctgctggag
gccgacatcgcggcccagaccgagcgtgtccaggccctcaacgccgccgcgctcaagttc
tccgagctggagggctaccaaccctgcgacccgcagatcatctgcaaccgcgtccaccac
gtccagacgtgcctggaggagctggaggagctggcggccaagaggaggaaggagctggag
gactcccgccagctctggaccttcttccaggagatggaggaggccgaggcctggatccgc
gagaaggagaagatcctggcggccaagacctgtggccgcgacctcagcagcgtggtgacc
ttgaccaacaaacacaagaccatgctgggcgagctgggcaaccgccgggcgctgctgcac
cagaccatgaagaaaggcgagaagatcctggccaagaagtccttcagctccgtgggcatc
caggagaagatgcgagaagtctgcttgcggtggaagaagctggaggaggtgacggggctc
caccagcaacgcttggaggacgccatgaacttcttccagttcagcgccgagatggacgac
ctggtggcctggctgcaggacacgtaccgcatcgtgtccagcgaggacttcggccacgac
gaccactccagccaggccctcctgcgcaagcaccgcgccgtggtggagcaggtggagaag
acccgcgccgccgtcctggccctgcgccagcacctggctctcctggcccccgaccaccgg
cagggcgtggacatccagatccgcgtggtggaggtggagcagctctacggagaggtggcc
gaggtggccgtgctgaggacgcagtggctgcaggacgctctggccgtctaccgcatgttc
agcgaggtccacgcctgcgaggtgtgggtggacgagaaggagcagtggttggagaagatg
gaggtgcccgaggagctggatgaggtggaggtgatccagcacaggttcgagagtctggac
caggagatgaacagcgtcatggggcgcgtcctggacgtcaaccaggtggtgcagcagctg
gtggatggtggccaccccagctcggacgaggtccggtcctgccaggaccacctcaacagc
cgctggaaccgggtggtggagctggtggagaacaagaagagccagctgagctccgtgctg
aagatccagaacttcctcctggagtgcagcgagatgaaggagcaggtgcgggagaagaga
agaaccatcgaggccacccagtctggtggcagcgacctgggcggggtcctggccctgcag
cgccgcctgtccaccatggaggccgccctggtggccctggaaccacggctggtggagctc
cagcaggagggcgagaccttggccgccgcccaccccgaccgcgccctggagatcctgctg
cccttcgaggagatcggccacgagtgggacaacctcaaacgggccctccaaggctgcgag
gacaccttgaccgtggccgggcgtctccagcagttcatccaggacctggacaacttcttg
ggctggttggtgaagacccaagcggccgtgggctccgaggaggtccccgagagcttggcc
gaggccgagaagctgctgaacgtccacgtggccctcaaggaggagatcaacggctacgag
gaggactacgccaagatccaggcggccagcgagctgctggccctggaggacatggaggtg
ccccacctgtccctccagcagtggctgcagaagttggacgcgggctgggggaagctcctc
cagagctgggacatgaggagggagctcctggtgcagtcccacgtcttccacctcttcctg
agggacgtgcagcagtgccagaagctcctctgcaagcaggagaccgccctggccaacgcc
gagctgccggacacggtggaaggggtgaccaaggcgctgaagaagcacaaggacttcacc
accacgctggagctgaacctgcagaaggtccagctggtcctgcaggccggcgagagcctc
cggcgccagggcaacctccacagcgagcgcgtggccgaggccatggaggagctccgcgcc
aggagcgagcagagccggggccgggcccgggaatgggcggagcggctgcagcggcagcgc
gacctggagagattccggggggcgtgcagagaggtaccgacccctcccctaattacgatg
gagtcgcaggtggaggagtggtccaaggaggtgggcgagctgcaggcgcaggcggcggcg
ctgccggcacaggcggccgggcgggacgcggtgggcgagcggcagagcgcggtggggacg
cgcatcgtgcgcctcatcgagcccctcaaggagcgcaggagantcctgctggcctccaag
gaggtccaccaggtcagccacgagctggaggacgaggtgatgtgggtccaggaccgcctg
cccttggccatgctgaaggaccacggcaccaacctccagaccgtccaacaattcatcaag
aagaaccagaacctgcgccgggagatccaggtgcaccggccccgcgtggacgaggtgctg
gaacgcgccgccgccgtcgcctccatcaggagccccgaggccgaggccgtgcggggcctc
ctggagcggctggccaccatgtgggcggagctgcaggagaagaccgagcgccggcagcag
gccctggatgccacctaccagctggagcagtactacttcgacgtggccgaggtggaggcg
tggctgggagagcaggagctgctcctgatgaacgaggagaagggcaaggacgagcagagc
accctccacctcctcaagaagcacctcctcaccgagcaaaccatcgacaactacgaggag
accatcgcgcagctctcccgccagtgccgcgccctcctggagctcggccacccccagagc
gaacaggtcagcaggcggcagtcgcaggttgaccggctctacgtgtctctgaaggagctg
gtggaggagcgcaaggtccacctggagcagcagtactggctctaccagctcagccgcgag
gtggacgagctggagcactggatcgccgagaaggaggtggtggccggctcgcccgagctc
ggccaggacttcgagcacgtcacgctgctgcaggagaagttcctggagttcgccagcgag
acgggcagcgtgggccaggagcgcatcgccgccgtcaaccagatggtggacgagctgatc
gactacggccaccgcgacgccgccaccatcgccgagtggaaggacggcgtcaacgaggcc
tgggccgacctcctggagctgatggagacccgcgcccagatgttggcggcgtcccacgag
ctgcacaagttcttcaacgactgcaaggaggtgctggggcagatcgaggagaagcggcgg
cggctgccggagctggcggcgcgcgacggccggagctccgccggggcgctgcagagggcc
ctgggcgccttccagcacgacgtggagctgctggtggcccaggtgcggcagctgcaggag
ggcgcggcgcagctgcggacgctctacgccggggacaacgccgaggccatcgccggccgc
gagcaggaggttctccgcgcgtggaaggagctcctggcggcgtgcgaggagtgccggctg
cacgtggccagcgtggccgagaagatccgattcgtgggcgccgtcagggatctgctggcc
tggatggacggggtgatccagcagatgggcgccgcggagaagcccagggacgtgtcctcg
gtggagctgctgatgaatgaccaccaaagcctcaagaccgagatggaggcccgggccaag
aacgtggccacctgcctggagctgggcaagaccctcatcctcagcaagagcccggcggcc
gacgagatcaaatcccacatggagaagctcctggcgaagaagaaggagatgacggagaag
tgggacaagcactgggagtggctgcagcagatgcgcgaggtgcaccagttcgcgcaggag
gccgtggtggccgacgcgtggctgacggcccaggagccgctgctgaagagccaggagctg
ggcagcagcgtggacgaggtggagcagctgatccggcggcacgaggccttccggaaggcg
gcggccgcctgggaggagaggttcagctccctgcggcgcctcaccacgatcgagaagctc
aaggccgagcagaaccagcagccgccgacgccgctcctgacccggaaatttccgggggat
ccggcgggaggagcgggaggagcggacgctccccggccggagccgcgcgtcgcctacgtc
cggcacgagctgcggccggagcgcctccagcccaagctggaccgtgtccaaccaccggcc
accgccggaggagccgaggagccggccccggccaccgccgccgagcccgtggtggccacc
aaggctgaagaacccaacgaggtccggccgggaccaccggagcggcgccgggagcgccgg
gagcgccggctggagcggcaggagtccagcgagccggagccgccgcggcacgacgggaag
agcggcggcaaagccaccctggccgacatcgtggagcagctgcaggagaaggaggcgggt
ggccccgtgccagcttcgccccgtgaccgcgactctcccgcccgtctccccgcgggcccc
gagtccctcccggagaggaccccccggccggagcgtccccgggcgcgggaccggccgaag
ccgcggcggcggccgcgcccccgggactcggcgcagggcccgggggaaccgcggcgctcg
cggtcggcgccggcgcagggcagcgcgccaccgccgccaccaccgcccacccacacggtg
acacacgaggggttcctgctgcgcaagcacgagctggacggcgccggcaagaaggcgtcc
aacaggtcgtgggtgaacctctactgcgtcctggccaagggcgacctgggcttctacaag
gacgccaaaggtcccgcggccggggccacccacggcggggagcccctgctgagcctccac
cgcgccaccgccgaggtggccaacgactacaagaagaagaagaacgtcttcaagctcaag
accggcgacgggagcgagttcctgctgcaggccaaggacgaggaggacatgcagggctgg
ctgcgggcgctggccgccagcgctcaggaacacgccgagctggcccggtggcaccaaggc
ctcctcaccacctcctccaccgacgaggggctcccccggcgcgaccccgaccggccccgg
cggaagtga
DBGET
integrated database retrieval system
