Taeniopygia guttata (zebra finch): 100226880
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Entry
100226880 CDS
T01082
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100226880 (SMC4)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
100226880 (SMC4)
Condensin II
100226880 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
ATG16
YwqH-like
Mce4_CUP1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100226880
NCBI-ProteinID:
XP_030136276
Ensembl:
ENSTGUG00000011171
LinkDB
All DBs
Position
9:complement(23843282..23871134)
Genome browser
AA seq
1318 aa
AA seq
DB search
MEGEQPTGTVPGKSTKTSTAARRKGREPLEESSVDLEVEDEGTREPDKEPPRAASDEVVD
NRSLEEILGSISPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGP
NGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHTSDEHENIQSCSVEVHFQKITDKEGDD
YEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGLLLRSHGIDLDHNRFLILQGEVEQ
ISMMKPKGQTEQDEGMLEYLEDLIGSARLKEPIQTLCRRVELFNERRGEKLNRVKMVEKE
KDALEEDKNKAIEYLCLENQIFKQKNQLYQYYIHDLKKRINDLEMEKEKINEETKSVNEK
SSKLAEETKTKNKTLKELEKKSNTIAKFIEENKQKFTQLDLQDVKVRENLKHTKSKAKKL
EKQLQKDKEKMEELRNIPSMSTKAIEDATAKRDQLTKAKDKEEAKLRQVLASLQEETKEI
QKEKEGKERELMEFSKEVSEARANMEIAQSELELYLSKYNSALAQLSQAQEALESTSNTV
KERKAAIRDIAEKLPQAEQQLREKENAVERLGKEESGTKDLVRNLRVKVEEAKSSLAQSR
SRGKVLEALLQQKRCGNIPGIYGRLGDLGAIDDKYDVAISSSCAALDHILVDTIDTAQDC
VNFLKAGGIGTATFIALDKMDVWEKKMQKIPTPENVPRLFDLVKVEDSRFRVAFYFALRD
TLVVKNLEEATRIAFEKEQRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVIDVSEE
EISKMESQLQRDSKRAVQCQEEKSQLEEDIRKLQQDIREMRNTSEKYTATIQGFSEQEIA
LKNQIKELEANVAAAAPDKTKQKELEKTLDGYKKDYERLAEQARKLEEEVKRLHQLIMDT
NNQKLKAQQDRIDKIDKEIDECSSAITKAQVAAKSADRNLKKSEEALQRTQKEIEENEKE
MKNLTAELTTLEEKATEVMNECKQAEEALPAVQEEQKKLVQEMKTIRDAEHALQSEALSI
KLKIDQVDSHISTHQGKVKYWQKEISRLSLHDIEGKAPEELRVLSQEELEALQEPDVLSK
RIALLEAQRHQLHPNLGAIAEYKSKEDLYLKHVEELDNITSERDKFREAYEELRKQRLNE
FMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVSLYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKIKNTTKNVATNPKILPLKGLEELGLPSGSVAKHREEATSSPMAAV
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggagcagccaacagggaccgtgccaggcaagagcaccaaaacctccactgca
gcccgtaggaagggcagggagcccttggaggagtcctccgtggacttggaagtggaagat
gaaggcaccagggagcctgacaaagaacctccccgagcagcctcagatgaggtggtggat
aatcgaagtttagaagagattttgggtagcatctctcctcccccacctccagcaatgacc
agtgaacctggtgctcctcgcctcatgatcactcacattgtaaaccagaacttcaaatcc
tatgcaggggagaaaattctgggaccttttcacaagcgtttttcatgtattatcgggcca
aatggcagtggcaaatccaatatcattgattccctgctttttgtgtttggctatcgagcc
caaaaaatccgctccaaaaagctctcggtgctgatccatacttctgatgagcacgagaac
atccagagctgttctgtggaagttcacttccaaaagatcactgacaaggaaggagatgac
tacgaagtcattcctgacagcaaattctgtgtctctagaactgcctatagagacaattcc
tccacctactacatcaatggcaagaaaaagacattcagagatgtggggctgcttctccga
agccatgggattgatctggatcataacaggttcttaattttacagggggaggtggagcag
atttccatgatgaagcccaaggggcagacggagcaggacgaggggatgctggaatatttg
gaggatctgatcggatcggcgcggctcaaggagcccatccagaccctgtgccgcagggtg
gagctgttcaacgagcgccgcggggagaagttaaaccgagttaaaatggtggagaaagaa
aaagatgccttggaagaggacaagaataaagccattgagtacctttgcttggaaaaccaa
atatttaagcaaaagaatcagttgtatcaatattacatccatgacctaaagaaacgaata
aatgacctggaaatggagaaggagaaaattaatgaagaaactaaaagtgttaatgagaaa
agcagtaaacttgcagaggaaaccaaaaccaagaataaaactttgaaagaacttgagaag
aaatccaatacaattgcaaagtttatagaggaaaataagcaaaagttcactcagttggat
ttgcaggatgtgaaagtgagggagaatctcaagcacaccaagagcaaggctaaaaaactg
gagaagcagcttcaaaaggacaaggaaaagatggaggaactgaggaacatcccctccatg
agcaccaaggccatcgaggacgccacggccaagagggaccagctgacaaaggccaaggac
aaggaggaggccaagctcagacaggtcctggccagcctgcaggaggagaccaaggaaatc
cagaaggaaaaagagggcaaggagcgggagctgatggagttcagcaaggaggtgagcgag
gcccgcgccaacatggagatagcgcagtcggagctggagctctacctgagcaagtacaac
tctgccctggcccagctcagccaggcccaggaggccctggagagcacctccaacaccgtg
aaggaaaggaaagctgccatcagagacattgctgagaaattaccccaggctgagcagcag
ctcagggagaaagagaatgctgtggagaggctgggaaaggaagaatccgggaccaaggat
ctcgtacgaaacctgcgcgtaaaagtagaggaagccaaaagttctttagcacaaagtcgc
agccgaggaaaagtgctggaggctctgctccagcagaagagatgtgggaatattcctggg
atctatggaaggctgggagacctgggagccattgatgacaagtacgacgtggccatttcc
tcctcgtgtgcagccttggatcacatccttgtggacaccattgacactgcccaggactgt
gtgaacttcttgaaggctggagggattggaactgccacctttatagccctggacaagatg
gatgtgtgggaaaagaaaatgcagaaaatcccaactcctgagaacgtcccgcggctcttt
gacctggtgaaggtggaggactccaggtttcgtgtggccttctacttcgctctcagggac
actctggtggtcaaaaacctggaagaagccaccagaatagcgtttgaaaaggagcaaagg
tggagggtggtaaccctgcaaggacaaatcatcgaggtgtcaggaaccatgactggtggg
ggaggaaaagtcatgaagggcagaatgggctcctcagttgtgatagatgtctcagaagaa
gagatcagcaaaatggaatcccagctgcagagggattccaaaagagccgtgcagtgtcag
gaggagaaatcccagcttgaggaagacataaggaaacttcagcaggacatccgggaaatg
aggaacacctcggagaaatacacagcgactatccagggattttctgagcaagaaattgct
ctcaaaaatcaaatcaaggaactcgaagccaacgtcgctgctgctgctccagacaaaacc
aaacagaaggagttggaaaaaacccttgatggttataaaaaagattatgagcgtttggct
gagcaggccaggaagctggaggaggaggtgaaacggctgcaccagctcatcatggacacc
aacaaccagaagctgaaggctcagcaggacagaattgataagatcgacaaggaaattgat
gaatgttcctcagccatcaccaaggctcaggtggcagccaagagtgcagacaggaacctg
aagaaatctgaggaggctctgcagcgcacgcagaaggagatagaagaaaacgagaaggaa
atgaagaacttgacagcagagctgacaacgctggaggaaaaagccaccgaggtgatgaac
gagtgcaagcaggctgaggaagccttgccagcagtgcaggaggagcagaagaagttagtc
caggagatgaaaactattcgggatgctgaacatgcccttcagagtgaggctctgagcatc
aagctgaaaattgatcaagttgacagccacatttccacccaccagggaaaggttaaatac
tggcagaaagagatctccaggttatccctgcacgacatcgagggcaaggcccccgaggag
ctgcgggtgctgagccaggaggagctggaggcgctgcaggagcccgacgtgctcagcaag
agaatcgcgctgctggaggcacagcgccaccagctccaccccaacctgggcgccatcgcc
gagtacaagagcaaggaagatctgtacctgaagcacgtggaagaattggacaacatcacc
agtgagagggacaaattcagagaggcctatgaagagctgaggaaacagaggctgaatgaa
ttcatggcaggatttaatgtcatcaccaacaagctgaaggagaactaccagatgctcaca
ctgggaggggatgctgagctggagctcgtggacagtctggatcccttctcagagggaatc
gtgttcagcgtccgacctcccaagaaaagctggaagaaaatcttcaacctgtcaggagga
gagaagaccctgagctccctggccctggtgtttgccctgcaccactacaaacccaccccc
ctgtatttcatggacgagatcgacgccgcccttgacttcaagaacgtctccatcgtatca
ctttacatctacgaacaaaccaaaaacgcccagttcatcatcatctccctgcggaacaac
atgtttgagattgcagacagattaattgggatttataaaatcaagaacaccaccaaaaat
gtggccaccaaccccaaaatcctgcctctgaaaggactggaggaacttggtctcccttcg
ggcagtgtagccaaacatagggaggaagcaacttccagccccatggctgctgtctaa
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