Taeniopygia guttata (zebra finch): 100226900
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Entry
100226900 CDS
T01082
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100226900
Enzymes [BR:
tgu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
100226900
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
100226900
Prokaryotic type
100226900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
CLIP_1
Motif
Other DBs
NCBI-GeneID:
100226900
NCBI-ProteinID:
XP_030136454
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All DBs
Position
9:16066638..16070252
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AA seq
501 aa
AA seq
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MRRGRGKRKAAVTEVPRVARRRTEGEEAIQEARRRAAPSVREFKYNKKRVRLVSQGSDLK
DDARCILYWMCRDQRVQDNWAFLYAQRLALKQELPLHVCFCLVPKFLGATIRHYRFMLRG
LQEVAEECAELNIPFHLLLGYAKDVLPTFVVEHGVGGLVTDFSPLRLPRQWVEDVKERLP
EDVPFAQVDAHNIVPCWVASPKQEYSARTIRGKIHAQLPEFLTEFPPVVPHPHLPSCPAE
PIAWEACYSSLQVDHTVKEVEWATPGTAAGMAVLKSFIAERLKSFSTHRNDPNKAALSNL
SPWLHFGQVSTQRAILEVQKQRRNYKDSVDAFVEEAVVRRELAENFCYYNENYDSVQGAY
DWAQTTLKLHAKDKRPYLYSLQELEQGTTHDPLWNAAQLQMVQEGKMHGFLRMYWAKKIL
EWTRSPEEALQFAIYLNDRYELDGRDPNGYVGCLWSICGIHDQGWAERPIFGKIRYMNYA
GCKRKFDVDQFERRYAPTHSQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggggacgcgggaagcggaaggccgcggtcacggaggtgccgcgcgtggctcgg
aggaggacggagggggaggaagccatacaggaggcccgtcggagggcggccccgtccgtt
cgagagttcaagtacaacaaaaagcgggtgcgcctcgtctcgcagggctcggacctgaag
gatgatgctcggtgcatcctttactggatgtgccgggatcagcgagtgcaagataactgg
gctttcctctacgcccagcgcctagccctcaaacaggagctgcctctgcacgtctgcttc
tgcttggtgcccaaatttctgggggccaccatccgccactacaggttcatgctgaggggc
ctacaggaggtggcagaggagtgtgcagagctgaacatccccttccacttgctgctgggc
tatgccaaggatgtactgcctacgtttgtggtggagcatggtgtgggtgggctggtgaca
gacttcagtcccctccgcctcccccggcagtgggtagaggatgtcaaggaacgcttgcca
gaggatgtgccgtttgcacaggttgatgcccacaacattgtgccctgctgggttgcctcc
cccaagcaggagtacagcgccaggaccatccggggcaagatccatgctcagctaccagag
ttcctcaccgagtttccccctgttgttcctcacccacatctgccctcttgcccagcagag
cccattgcttgggaggcatgttattccagcttgcaggtagaccacaccgtgaaggaggtg
gagtgggcaacccctggcacagctgcagggatggctgtgctgaagtccttcattgcagag
cggctgaaatccttcagcacccacaggaatgatcccaacaaggcggctctcagcaacctg
tccccatggcttcacttcggccaggtttccacccagagagccatcctggaggtgcagaag
cagcggcgcaattacaaggactcggtggatgcatttgtggaggaggctgtggtgcggcgg
gagctggctgaaaacttctgctactacaatgagaactatgacagcgtgcagggtgcctat
gactgggcgcaaaccaccctgaagctccatgccaaagacaagaggccttatctgtacagt
ctgcaggagctggagcagggaaccacacatgacccactctggaatgctgcccagctgcag
atggtccaggagggcaagatgcatggcttcctgcggatgtactgggccaagaagatcctg
gagtggacacgctcccctgaggaggccctgcagttcgccatctacctcaacgaccgctac
gagctggacgggagggaccccaatggatacgtaggctgcctgtggtccatctgtggcatt
cacgaccagggctgggcggagcggcccatcttcgggaagattcgctacatgaactacgcc
ggctgcaagcgcaagttcgacgtggaccagtttgaacgtcgctacgcccccacacactcc
cagtga
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