Taeniopygia guttata (zebra finch): 100226945
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Entry
100226945 CDS
T01082
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgu00535
]
100226945 (COL14A1)
Proteoglycans [BR:
tgu00535
]
Extracellular matrix (ECM) proteoglycans
Others
100226945 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
Fn3_Dep-1_4th
VWA_3
Motif
Other DBs
NCBI-GeneID:
100226945
NCBI-ProteinID:
XP_030122476
Ensembl:
ENSTGUG00000012390
LinkDB
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Position
2:139582280..139691822
Genome browser
AA seq
1886 aa
AA seq
DB search
MLCRYEIQSCFLLAFLAVTAFFTSDVQGQVSPPTRLRYSVVSPDSIQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFSEDKESKPAQGQFRIKDI
ERRKDTSKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIASLGTPSDLVT
SEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSESTAVLKNLMSLTEYQVA
VFAIYSNAASEGLRGTETTLALPMASDLQLYDVSQSSMRVRWNGVLGATGYMILYAPLTE
GLAADEKEIKIGETSTDLLLDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPANL
KFSDVGHNSAKLSWDPASKNINGYRIMYVKTDGTETNEVEVGRVSTHTLKSLAPLTEYTV
ALFSQYDEGQSEPLTGSFTTKRVPAPQHLEIDEVSTDSFRVSWKPTSSDIAFYRLAWIPL
DGGESEEVVINGDADSHVIEGLLPDTEYEVSLLAVFDDKSESEVVAILGATSASATTVPS
TVTTTSATAPEPSTAVFRTGVRNLVIDDETTSSLRVTWDITDYSVQQFRVTYLTAEGDRA
EEAVRMVMVPGRQNTLLLHPLLSDTEYKVTVTPIYSDGEGVSVSAPGKTLPLSAPRNLRV
SEEWYNRLRISWDAPPSATMGYRVVYKPVNTPGPALETFVGDDINTILILNLFSGTEYSV
KVFASYSTGFSDALTGVAKTLYLGVMNLDSYQVRMTSLCAQWQLHRHATAYRVVIESLED
GKKQEVNLGGGTPRHCFFELMPGTRYKISVHTQLQELEGPAVSIMETTLPFPTQPPTTPS
TPPPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIINFLYSTVGALDKIGPDGTQ
VAIIQFTDDPRTEFKLNAYKTKETLLEAIQHIAYKGGNTKTGKAIKHAREFLFTGEAGMR
RGIPKVLVVITDGRSQDDVNKVSREMQLDGFTFFAIGVADADYSELVNIGSKPSERHVFF
VDDFDAFTKIEDELITFVCETASATCPLVVKDGNNFAGFKMMEMFGLVEKEFSAVEGVSM
EPGTFNVFPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNE
AYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKI
IIDCKEVGEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIICATSWANRDK
CCELPGLRDEESCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPR
GEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQG
QRGFPGKDGPTGPQGPPGPMGIPGAPGVPGVTGSQGPQGDVGAPGPPGAKGERGERGDLQ
SQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQ
GSPGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGP
PGSPGPRGPAGHTGSPGSQGPAGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSY
QIYDPEDLYDGEQQPYVVHGSYPLPSPYSQSYPSPHLAQPEFTPVQEEMEAVELRSPGIS
RFARRIAKRSAKTPVRTKANGKSPPQ
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccgatacgagatacagagctgttttctcttggctttcctagctgtcacagct
tttttcaccagtgatgtccagggtcaagtgtccccaccaacaagactaagatatagtgta
gtgagtcctgacagtatacagatctcttggaaagcccccaaagggcaattcactggatat
aaacttcttgtcactccaagttcaggtggaaaaacaaatcaattaattcttcaaaatact
gcgaccaaagcaattattcaaggtctcattccagatcaaaattatgcccttcagatcatt
gcattcagtgaagacaaggagagtaagccagcacaaggccagttcagaattaaagacata
gagagaagaaaagacacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcaagc
aaaccagctccagaaggaagcctgtttacctgtaaaactccagcaattgcagatattgtg
atactagtagatggttcttggagtattggcagattcaatttcaggctcgttcgactgttc
ctggaaaacctggtttctgctttcaatgtgggatctgagaaaacaagagtaggtcttgca
cagtacagtggtgatccccgaattgagtggcacttgaatgcctatggcacaaaggatgct
gttctggatgcagtccggaatctaccatataagggggggaatacattaacaggtcttgcc
ttaacttacattttggaaaacagctttaagcctgaagcaggtgcaagacctggagtatct
aaaatcgggatactgattactgatgggaagtcccaggatgatgttatccctcctgctaaa
aacctacgagatgctggcatagagctgtttgctattggtgtaaagaatgcagatataaat
gaactgaaagagattgcctctgagcctgacagcacacatgtctacaacgtggctgatttt
aacttcatgcataccattgtggaaggtcttaccagaaccgtgtgctcacgagtagaggag
caggaaaaggaaatcaaaggaacaattgcttctcttgggactccttcggatttggtcaca
tcggaggtgacagccagaggcttccgggtcagctggacccatgcaccaggcaaagtggaa
aagtacagggtggtgtactaccccactcgaggagggcagccagaagaggtcgtggtagat
ggaagtgaatcaacagcagttctgaaaaacctgatgtctttaactgagtaccaggtagct
gtgtttgctatctactccaacgctgccagcgagggcctccgtggaacagaaaccacactt
gccttgccaatggcctcggatctgcagctgtacgacgtgtcccagagcagcatgagggtg
aggtggaatggggtcctgggtgccacagggtacatgatcctctacgctcccctcacagaa
ggattggcagccgatgagaaggagataaaaattggggagacctcaacagacctgctactg
gatggactattgccaaatacagaatatacagtcacagtttatgccatgtttggagaagaa
gctagtgatcctctcacaggacaagaaactacattgcctctcagtccaccagcaaacttg
aaattttcagatgttggacacaacagtgctaagctatcatgggaccctgcttccaaaaac
ataaacggctatcgcatcatgtacgttaaaacagacggaacggaaaccaatgaggtggaa
gttggtcgtgtttcaacccatactctcaaaagtttggcaccccttacagagtatactgtt
gctcttttctcccagtacgatgagggccagtctgaaccacttactggcagttttaccaca
aagcgagttccagctccccagcatttggaaattgatgaagtatcaacagatagcttcagg
gtcagctggaagcccacctcatcagatattgctttttacagattggcatggattcctttg
gatgggggggagtctgaggaggttgtcataaatggagatgcagacagtcatgttatagag
ggtctcttgcctgacacagaatatgaagtttctctgctggcagtttttgatgacaaaagt
gaaagtgaagttgttgctattcttggagctacatctgcaagtgccaccacagtgcccagc
acggtgaccaccaccagtgccacagcccctgagcccagcactgcagtttttcgaacagga
gtcagaaatcttgttatagatgatgaaacaacctcaagtctgagggtgacatgggacatt
accgactacagtgttcagcagttccgagtgacctacctcactgcagaaggtgaccgtgct
gaggaagcagtaagaatggtaatggtgcccggcagacaaaacactcttttacttcaccct
ctgctgtctgatacagaatacaaagttactgtaacccccatctattctgatggggaggga
gtcagtgtctcagctcctggcaaaaccttgcccctgtctgctcccaggaatttacgtgtc
tcagaggagtggtacaacagattacgtatcagctgggatgccccaccttcagcaacaatg
ggttacagggttgtctacaaacctgtcaacactcctggtcctgcattggagacttttgta
ggggatgatattaatactattcttattctaaatctcttcagtggaacggaatacagtgtt
aaagtatttgcttcatactcaacaggcttcagtgatgccctaacaggcgtggccaaaacc
ttgtatttgggagtgatgaatttggattcctaccaagttcgcatgacaagtctgtgtgct
cagtggcagcttcacagacatgctactgcttacagggtagttatagagtcactcgaggat
ggaaaaaagcaagaagtaaatcttggtggagggacacctagacactgtttctttgagctg
atgcctggaaccagatataaaatcagtgttcatacacagcttcaggagctggagggccct
gctgtgagcatcatggagacaacgttaccatttcctactcaaccaccaacaacaccttca
acaccacctccaccacctacaatcccacctgcaaaagaggtgtgcaaagcagccaaagct
gatctggcattcctggtggatgggtcatggagtattggagatgacaatttcaacaagata
attaacttcctttatagcactgtgggagctttggataagattggtcctgatggaacacag
gtggcaataattcagtttactgatgatcccaggacagaatttaaattgaatgcatacaaa
acaaaagagactcttcttgaagctattcagcatatagcatacaaaggaggaaatacaaaa
acaggcaaagccattaaacatgcacgagaattcttatttacaggagaggcaggcatgagg
aggggcattccaaaggttttggttgtcatcactgatgggcgatcacaggatgatgtgaac
aaagtctccagagaaatgcaactagacggttttaccttttttgctattggagtggctgat
gctgactattcagaattagttaatattggcagcaagcccagtgaacgacatgtcttcttc
gtggatgactttgatgcctttacaaagattgaagatgagctgatcacttttgtttgtgaa
actgcatcagcaacctgcccactggtagttaaagatggcaataattttgcaggattcaaa
atgatggaaatgtttggtttggttgaaaaggagttttcagctgtggaaggggtttccatg
gaacctggtacatttaatgttttcccatgttacagactgcacaaggatgctctggtatcc
cagcctaccaagtatttgcatcctgaaggtctcccttctgattacaccatcacgtttctc
tttcggatactgccggacacacctcaggagccctttgctctgtgggagattttaaatgaa
gcctatgaaccactggttggagttattttagataatggtggaaaaactctgactttcttt
aactatgactacaaaggagattttcaaactgtaacgtttgaaggccctgaaataaggaag
atattttatgggagttttcataagttgcatgttgttatcagcaagaccacggccaagata
attattgactgcaaggaagtgggtgagaagaccattaatgcagcagggaatattagttct
gatggcatagaagtgttggggaggatggtgagatccaggggaccaagagacaattctgca
ccgctgcagttacagatgtttgacattatttgtgctacctcatgggccaatcgagacaaa
tgctgtgaacttcctggcttgagagatgaggaaagttgtcctgcccttcctcatgcttgt
tcctgttcagaagccaataagggtccccttggacctcctggaccaccgggtggtccaggt
gtcagaggtgccaaaggtcatcgtggtgatccaggtccaaagggaccagatggacctcga
ggtgaaattggtgttcctggaccacagggacctccaggaccacaaggacccagtggactt
tctattcaagggcttccagggccaccaggtgaaaagggagagaagggagatcttggtttt
cctggcctgcagggtgtcccaggagcatcaggttcaccgggaagagatggagctcaaggt
caaaggggctttcctggcaaggatggacccacaggcccacaaggacctcccggtccaatg
ggcatacctggtgctccaggtgttccaggtgttactggaagtcaggggccacaaggtgat
gttggagctcctggtcctcctggagctaagggggaaaggggtgaaaggggcgatctccag
tcccaagcaatggtccgggctgttgctcgtcaagtgtgtgagcagctcatccaaggtcat
atggcaagatataactcgattctgaaccagattccaagccagtctgtctcaacacgaacc
atcgcgggacctcctggtgagccaggtcggccaggggctccagggccacagggtgagcaa
ggatcaccaggcatgcaagggtttccaggaagccctggtcagccaggaagaccaggagaa
agaggtttaccaggtgagaaaggagagaaaggcaatccaggtgttggaacacaaggaccc
cgaggcccaccaggatccacaggacctccaggagaaagtcgaactggcagcccgggacca
ccaggatctccaggcccacgaggtcctgctggtcacacagggtccccgggctcacagggt
cctgctgggcctccagggtactgtgacccatcctcctgcgctgggtacggcatgggaggt
ggatacggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctac
caaatctatgaccctgaggacctttatgatggtgagcaacagccgtacgtagttcacggg
tcctaccccttaccatccccatactcccagtcctatccatcacctcatcttgctcaacca
gagtttactcctgttcaagaagagatggaagccgttgagctgagatccccgggaatcagt
cgcttcgcaaggaggatagccaaaaggagtgccaagaccccagtacgcacaaaggcgaat
ggaaaaagcccccctcaatga
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integrated database retrieval system
