Taeniopygia guttata (zebra finch): 100227016
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Entry
100227016 CDS
T01082
Symbol
DCTD
Name
(RefSeq) deoxycytidylate deaminase isoform X3
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00240
Pyrimidine metabolism
tgu01100
Metabolic pathways
tgu01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
100227016 (DCTD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tgu02044
]
100227016 (DCTD)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
100227016 (DCTD)
Secretion system [BR:
tgu02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
100227016 (DCTD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC4_like
SNAD4
APOBEC_N
Motif
Other DBs
NCBI-GeneID:
100227016
NCBI-ProteinID:
XP_012428966
LinkDB
All DBs
Position
4:32260845..32321460
Genome browser
AA seq
188 aa
AA seq
DB search
MSGPQPGQQRNGEASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVG
IGYNGMPNGCSDDVLPWTRTGANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPC
NECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKCNKIIIDFDSIN
SRPSQKLL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcccccagcccggccagcagcggaacggtgaagcatcctgcaaaaaaagagag
gattatttggaatggcctgaatattttatggcagtagcttttctgtcagcacaaagaagc
aaggatccaagctctcaggttggtgcctgcattgtaaattcagaaaacaagattgttgga
attggctacaatgggatgcctaatggttgcagtgatgatgtactaccttggacaagaaca
ggagcaaatagactagacacaaaatatccttatgtgtgccatgccgaattgaatgccatc
atgaacaaaaactcagctgatgtgaaaggctgcagcatgtatgttgccttatttccatgt
aatgaatgtgcaaagctcatcatccaggcaggcataaaggaagttattttcatgtctgac
aagtatcatgacactacagaaatgacagctgcacggcggatgtttgatttggcaggtatt
atatatagggaattcaagccaaagtgtaacaagatcatcattgactttgattcaattaac
agcagaccaagtcaaaagcttctgtga
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