Taeniopygia guttata (zebra finch): 100227055
Help
Entry
100227055 CDS
T01082
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X2
KO
K23112
BRCA1-associated ATM activator 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100227055 (BRAT1)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100227055 (BRAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
HEAT_2
RTP1_C1
DUF445
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
100227055
NCBI-ProteinID:
XP_030140222
Ensembl:
ENSTGUG00000008077
LinkDB
All DBs
Position
14:4066292..4074545
Genome browser
AA seq
853 aa
AA seq
DB search
MCDPQSRFVARARRRFAMTRECAVLLPGVCAALADPRQPGLDDTCLEKLLDWFRSLTWFD
PTVELVRDNPCVTELISSVLALPDPSPSILAFTLQLAGILASSESRFQLLQEKLLGRLFG
REGPRGGAAWEDASVRSAWLKGVHSMLHHLPALHCLCSTGGMDVIFTLQGDPSLFVASAA
SQLLVHMLTFSVDSETPKALSTEDCDWPPCAQMIVNHIKESLQSSSTSDIEQSLKLLSSL
FGSCFGSCYAAWTEVLWLDIAKHIESFLLEETLQAQPVLASLLLNVARSPVFCGTEGSFW
ALVTSALEHLTPVQAAPLAVGLLKLCKCPQDVRIQALTVLLQPMDCILRAASQPLECAGL
LDESVSDPVTVESLLSSKTSCAGLLCQTLAHLEKLLSLKHLIVDLPSVSLLHSLMTILQL
CNGFLSPASPLGSTISRNLINSFRVQKSALDVLAALSEKKDCDTLIGSLFDVLLAYLQSP
NTNPTVLKKTFQATSKWLVHLQELSSSSSQWQQTEKILEDVFVVLQKRLCSPCWEVRDSS
LEFLTSMVKCLREQKEFRQCLLSSEVLRLTENLLEDPESYVRASAVTALGHLALITCFAP
ESPVIGNLYNKESIVAKLQEILSTDSEGFPRRAVISTFTKWLREGCTGQLEDTEQFVSRV
IQTVEHDLDWEVRLGGLELVEVFCSQTICQLSQCPYAPVSSALKNSTPQNELLQVFCRAK
LFGFLFGSLCDCDKPVGQRACDVLLGLRGHFYPVSTLENPQEIEDSPAGRGIAWLQRTLR
QGSLAQNFPTDGGVGVDFQDPESMMLALGAIDLLELHDELNKSSDHVEESPQSLLQDILA
TLGTTEDNEVDCY
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatccccagtcccgcttcgtggcccgggcccgccgccgcttcgccatgacccgc
gagtgcgccgtgctgctgcccggagtctgcgccgccctggccgacccgcggcagcccggc
ctcgacgacacctgcctggagaagctgctggactggttccgcagcctgacgtggttcgat
cccactgtggagctggtgcgggacaacccgtgtgtgacagagctcatcagctccgtgctg
gccctgccggaccccagccccagcatcctggccttcaccctgcagttagccgggatcctc
gcctcctccgaaagccgcttccagctcctgcaggagaagctgctggggaggctctttggc
cgggaggggccccggggcggcgcggcgtgggaggacgcgtcggtgcgcagcgcctggctg
aagggagtgcacagcatgctccaccacctgcctgccctgcactgcctctgctccacggga
ggcatggatgtgatcttcactctgcaaggggatcccagcctgtttgtggcttcagctgcc
agccagctcctggtgcacatgctcaccttctccgtagactctgaaacaccaaaagctctc
agtaccgaggactgtgactggccaccatgtgcccagatgattgtaaaccacataaaggag
tcacttcagtccagctctacctctgacatcgagcagtcactgaagctgttgagcagtttg
tttggcagttgttttggcagttgttatgctgcatggactgaagttctttggttagacata
gcaaagcacatagaatcctttctgctggaggagactcttcaagcacagcccgtgctggca
agtcttttgcttaacgtggcacgatcccctgtgttttgtggcactgaaggcagcttttgg
gcattagtaacttctgctctggaacacttaaccccagtacaagcagctcctctggcagtg
ggacttttgaagctctgcaaatgcccacaagatgtcaggattcaggcactgactgttctg
cttcagccaatggactgtattttgagagcagcctcccagcctctggaatgtgcaggcttg
ctggatgagtctgtcagtgatcctgtcactgttgaaagtcttctgtcctccaagacatct
tgtgccggtctcctgtgtcagacactcgctcacctggagaagctgctgtctctgaaacat
ttaatagtggatttacccagtgtgtctttgctgcactctctcatgacaatattacaactc
tgcaatggcttcctgagcccagcttctcccctgggaagcacaataagccgtaatttgatc
aattccttcagagtgcaaaagtcagctcttgatgtccttgcagcactctcagagaaaaaa
gactgtgacactctcataggaagtttatttgatgtccttctggcatatctgcagagtcca
aacaccaaccctactgttctaaagaaaacctttcaagctacatccaagtggttggtgcac
ttgcaggaactgtcctcctccagcagtcagtggcaacaaacagagaagattttggaagat
gtgtttgtggtgctgcagaaacgtttgtgcagtccttgctgggaagtaagagattcttcc
ctggagttcctcacttccatggttaagtgcttgagagagcagaaggagttcaggcagtgt
ctcctgtcctcagaggtgctgaggctcacagaaaacctgctggaggacccagagagctac
gtgcgagcgagcgccgtgactgcgctgggacacctggccctcattacttgctttgctcca
gagtcacctgtcataggcaatctatataacaaagagagcatcgtagcaaaacttcaggaa
atcttgtcaacagactcagagggctttcctaggagggctgtgatcagcaccttcaccaag
tggctgagagaaggctgcacaggtcagctggaagatacagaacagtttgtctctagagtc
atccagactgtggagcatgacttagactgggaagtcagacttggtggtttggagctggtt
gaagttttctgtagtcagaccatttgccagctttcccagtgtccctatgctcctgtctcc
tctgcactcaaaaattccacccctcagaacgagctgctgcaggtgttctgtcgagcaaag
ctgtttgggtttttgtttggctctttgtgtgactgtgacaaacccgtggggcagagagcc
tgtgatgtgctgcttggcttgagaggtcatttctaccccgtgagtactttggagaatcca
caggagattgaagattcacctgcaggacgtggcattgcctggttacagaggacactgaga
cagggttctctggctcagaatttccccacagatggtggtgtcggggtggatttccaagat
ccggagagcatgatgttagctttgggtgcaatagacttgctggagctgcatgatgagcta
aataaaagcagtgaccatgtggaagaaagccctcagtccctcttacaggacatccttgct
actctggggaccacagaggataatgaggttgactgttactga
DBGET
integrated database retrieval system
