| Entry |
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| Symbol |
PARPBP
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| Name |
(RefSeq) PCNA-interacting partner isoform X1
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| KO |
| K27412 | PCNA-interacting partner |
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| Organism |
tgu Taeniopygia guttata (zebra finch)
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| Brite |
KEGG Orthology (KO) [BR:tgu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tgu03400]
100227265 (PARPBP)
DNA repair and recombination proteins [BR:tgu03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100227265 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
100227265 (PARPBP)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1A:complement(53328987..53367436)
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| AA seq |
577 aa
MVTFQQKILHLVKCFRRQWRLFSNSERTTVCGADCMLMALQLSMAEVNKQHHGDFTVSLS
DVLEMWNYLLHDKLGLYENMKEPENYTDVKKAYNAFLARSNMLDLIDIYEKCYSLGLLAE
DESISPVQLLEFISGVMNAQENNGCLLSTPTQINRQGQNHMKMTILAKKSVCSYLSLLVN
SKDDLAVAHILNVPDRGLGREAFTNLKHASQERKMSIFLMAISFIRTIELGGRDFASSMY
DPLRAHVKGLSNFVNFIDKLQEIVGEILNTRIAGGRILSTVKMHLIKGRSNGDPFCQAVE
EAVQDLDLKIKNIIDSQQEILTASTTGVSPARPKLHSINHGTAYCGRDTVKVLLVLLDEE
AVSPPTQNKADLLCDNESLNLCGITSVLTLFRSPARSNGSSPKPLRQRILKSMDEKVIKM
KQSSIKSQFACTYKNDLSEKNGQHSHAIPTCKHPAPKQHLKAGKPTEGPNSYLDVPGLGT
ISESVHQTRSYTEMGKLSCQPRNKNSENEQMDLNNDKVICDKESEPSLQKNTKRLKTSNS
SKKELDSKIGGKRKQTKTASKNKLIAGQSKLTRFFQL |
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| NT seq |
1734 nt +upstreamnt +downstreamnt
atggttacttttcagcaaaaaattttacatttggtcaagtgtttcagaagacaatggcgt
ttattttccaactctgaaaggactactgtatgtggagcagactgcatgttgatggcgtta
caactgtccatggctgaagtcaataaacagcaccatggagacttcacagtatcacttagt
gatgtgttggaaatgtggaactatttgttacatgacaaactgggattgtatgaaaacatg
aaagaacctgaaaattatactgatgtgaaaaaagcctataatgcctttttggcaagaagc
aatatgctagatttaatagacatatatgagaagtgctatagtcttggacttttagctgaa
gatgaaagcatatcccctgttcagctgttggaatttatttctggtgtaatgaatgcacaa
gaaaataatggttgtcttctttctactcctacacaaatcaatagacagggccagaaccat
atgaagatgacaatcctggcaaagaaatcggtctgttcatatttaagccttttggtgaat
tctaaggatgatctggcagtggctcatattctgaatgttcctgacagaggacttggtaga
gaagccttcactaacctgaaacatgcctcacaggagagaaaaatgtcaatttttctgatg
gcaatctcttttatccggaccatagaacttggaggaagagactttgcatcttctatgtat
gatcctttaagagcccatgtaaaaggtctttccaactttgtgaattttattgacaagctg
caagaaattgttggtgaaatcttaaatacaagaatcgcaggggggcgaattctgtcaaca
gtgaagatgcatttgataaaaggccgaagcaatggggatcctttctgtcaggcagtagag
gaagctgtacaagacttggatttgaagattaaaaatattatcgattcacaacaggaaatc
ttgactgctagcactactggagtcagtccagcacggccaaaattgcattctataaatcat
ggcactgcatattgtggcagagatactgtaaaggtcttgctagttcttctggatgaagaa
gctgtcagtcctcctacccagaacaaagcggatctgttgtgcgacaatgaaagcttaaat
ttgtgtggcatcacatctgttttgacactcttcagatctccagcacgatccaatggttct
tctccaaaacctcttagacaacgtattctgaaatctatggatgaaaaagtaattaagatg
aagcaatcttcaattaaatcccagtttgcctgtacgtataaaaatgatttgagtgaaaag
aatggtcagcattcccatgcaattccaacctgcaaacatcctgcaccaaagcaacattta
aaagctggaaagcccacagaaggtccaaattcatatcttgatgtaccagggcttggaact
atttctgaaagtgttcaccagactagaagttatacagaaatgggaaagctgagttgtcag
ccaaggaacaagaactctgagaatgaacagatggatttgaataatgacaaagtaatctgt
gacaaggaaagtgaaccatctttgcaaaaaaatactaaaagacttaagacttcaaacagc
tctaagaaggaattggacagcaaaattggtgggaaaagaaaacagaccaaaactgcaagt
aagaataagttgattgctggtcagtcaaaattaactcgcttttttcaactctaa |
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