Taeniopygia guttata (zebra finch): 100227311
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Entry
100227311 CDS
T01082
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100227311 (CARMIL1)
Membrane trafficking [BR:
tgu04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100227311 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Spectrin_5
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
100227311
NCBI-ProteinID:
XP_030121726
Ensembl:
ENSTGUG00000008921
UniProt:
A0A674H079
LinkDB
All DBs
Position
2:complement(93224888..93419442)
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AA seq
1435 aa
AA seq
DB search
MAEESSDVPKELIESVRDVIGRKIKISVKKKVKLETKGDKVDNKILVLASCRAFLLTSRI
PTKLELTFSYLEIQGVTSSKPGQLIMETEKCSISMKMASSEDVNEVLAHIGTCLRKIFPG
LSPVRIMKKVTMEPSERLANLQALWDSQTVAELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDLCEQILR
VVSRSSRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLASNPLEDRGVSSLSIQF
AELPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLIANTLVYLDLSGNALRGDDLSSLYNF
LAQPNALVHLDLSNTECALDMVCGALLRGCLQHLAVLSLSRTLFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLPPEPLKALLLGLACNHNLKEVSLDLSSCELGHCLRSGGAQVLEG
CIAEIHNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLV
QMIQDEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQ
INTKLRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDAVQED
VKCAERLMRDAKNSKTLLPNLYHLGGAAWAGANGSLSNPIQETLESMAGEVTRVVDEQLK
TLLESMVDAAENLCPNVMKKAHIREDLIEASTEKISIPRTFVKNVLLEQSGIDILNKISE
VKLTVASFLSDRVVDEILDALSHCHHKLADHLTRRGKPLPQQESLEIELAEEKPTKRSMI
TVEELTEIERLEDLDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVP
IHIEDPPFPSSRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQPSQAAVSAGVPPE
GDQNGLMGRVDEGVDEFFTKKVTKMDSKRPSTKSSDSSEHSEAGDEKKKRDSRKSGFLNL
IKSRGSKSERPQTVSVAEEPSSPKVAAKSPALDTSKKEAKPAEQNGGTERSEELKTPDSL
EEVQTDDVAKAERGDSKGSPQGGRRYGVQVMGSGLLAEMKAKQEKRAASAQKKLGNDTTP
RESFDTTMSSERLDGSGTVPKQQQTLPESRFALNKGDSISASSEKNSKAEPKAEAGAKAR
SSSNTPTSPKPPLQSTKPSLAGRPTVPQKPRSASRTEDAPESPSGPSSPKVALLPPVLKK
VPSDKEKDGQSSPSVRSFSQEEQTGDCQKRDAALDCAKPSGSVKTTPGQYSTSAEEEANV
LGQRMAQATSAAKRSPGQQAHEFQELKQRSLSKDGHQGSKSSDSGEEADKDFIFI
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagagctccgacgtccccaaagagttgatcgaaagtgtcagggatgttatt
gggaggaaaatcaaaatttctgtcaagaagaaagtaaagctggaaaccaagggagataaa
gtggataacaaaatattggtgttggcatcatgtcgggcatttcttttaacgtctcggatt
cccaccaagttagaactaactttcagctacttggaaatccaaggagtaacttccagtaaa
ccaggccagttgattatggaaacagagaaatgcagcatctccatgaagatggcatcctca
gaggatgtgaacgaggtgctggcacacattgggacgtgcctcaggaagatattccctgga
ctctccccagtgaggattatgaaaaaagtaactatggagccttcagaaagactggctaat
ctccaggccctgtgggacagtcagacagtggcagaacttggaccttgtggaggcttttcg
cagatgtatgcttgtgtttgtgactggcttggatttccctacagagaggaagtacagtgg
gatgttgatacgatttatctgacacaagataccagagagttgaatttgcaagacttcagc
caccttgaccacagagacttaatacctatagttgctgctctggagtataatcagtggttt
acaaagctgtcctccaaggatctgaaattatccactgatctctgtgagcagatactgcga
gtggtgagtaggtccagtcggttggaagaactggtattagagaatgccgggcttagaacg
gattttgcacagaaactagccagtgccctagcccataatcctaactcaggactccataca
atcaaccttgctagcaatccacttgaagatagaggtgtgtcatctttgagcatccagttc
gccgaacttccaaagggactgaagcatttaaatttatctaaaacctccttgtcacctaaa
ggggtgaacagcctttcccagtcactgagtgccaactcgctgatcgccaacacgctcgtc
tatctcgacctctcagggaatgcgctccgcggagatgatctctcaagcctgtacaatttt
ttggcccagccaaatgcccttgttcacctggatttatccaacacggagtgtgcactagat
atggtttgtggagccctccttcgtggatgtcttcagcatctagctgttcttagcctctca
aggactctgttttctcacagaaaaggaaaagaagtccctccctccttcaaacagtttttc
agcagctcacttgctttgatgcagattaacctttcaggaactaaactccctcctgagcct
ctaaaagcgcttttattaggcctggcttgcaatcacaatctgaaggaggtgtctttagac
ctcagtagctgtgagcttggtcactgtttaagatctggaggtgcacaagtcttggaagga
tgcatagcagaaatacacaatatcaccagcctagatatttcagacaatggcctagaatct
gacctctcaacccttgtagtctggcttagtaaaaaccgatcgataagacatttggcatta
ggcaaaaactttaacaacatgaaatccaaaaatctcactccagtacttgataatttagtt
cagatgattcaagacgaggattcacctctacagtcactgtccctcgcagattccaagctg
aagactgaggtcaccatcattattaatgccttgggcagcaatacttctctcacaaaagtg
gatattagtggaaatgccatgggagatatgggagcaaagatgctggcaaaagccctacag
ataaacaccaaactcagaactgtaatatgggacaagaataacatcactgcacagggcttc
caggacatagctgtggcgctggaaaagaattatacattgagattcatgcctataccgatg
aatgatgcctcccaagcactcaaaacaaaccctgagaaaacagaagaggcactgcaaaag
atagaaaactacttgcttcgtaaccatgagaccaggaagtacctacaggagcaagcatat
cggctgcagcaaggcattgtcactagcaccactcagcagatgattgacagaatatgtgta
aaagtgcaagatcatctcaactctttaaggaactgtggtgtggatgctgtacaggaggat
gtcaaatgtgcggaacggctgatgagggatgctaagaactccaaaacacttttaccaaat
ctgtatcaccttggaggagctgcttgggcaggagcaaatggttcactttccaatccaatc
caagagacacttgaatccatggctggagaagtcacaagggtagtggacgagcaacttaag
acactccttgagtctatggtggatgcagcagaaaacctttgcccaaatgtaatgaagaag
gctcacatccgtgaagatctcattgaggccagcactgagaagatttccatcccacgcact
tttgtaaaaaatgtcctcttggagcaatctggaattgatatcctcaataaaattagtgaa
gtaaagctgacagtggcttctttcctgtctgaccgagttgtagatgaaatcctggatgca
ctctcccattgccaccacaaactggctgaccacttgaccagacgtggcaaaccacttcca
cagcaagaatcactggagattgagttagctgaagaaaaacccactaaacgctctatgatc
acagttgaggagttgacagagatagaacgtttggaggatctggacacttgtatgactctc
tgctgtacaagtatgactcctaaatcaaaaaggaaaagcatccacagtagaatgctccgg
ccagtgtccagagcttttgaaatggaatttgatctagataaagcactggaagaagtacct
atccatatagaagacccaccatttccttccagcaggccagacaaacgaacttctggattc
atttcagagctgccatcagaagaaggaaggaaactggaacactttacaaaattaaggccc
aaaaggaataaaaagcagcagcccagccaagcagcagtgtctgctggagtaccaccagaa
ggggatcagaatggcctcatggggagagtggatgaaggtgtagatgaatttttcactaag
aaagtgacaaaaatggattcaaagagaccatcaactaaaagttcagacagcagcgagcac
agtgaagcaggtgatgagaagaagaaaagggactcgaggaagagtggtttccttaactta
atcaaatcaagaggctccaaatctgaacgcccccagaccgtgtcggtggctgaggagccc
tcctcacccaaggttgctgcaaaaagcccagctttagacaccagcaagaaggaggcaaag
cctgcagagcagaacggcggcacagagcgatccgaggaattaaagacaccggactccctg
gaggaggtgcagacagatgatgtggcaaaagctgagagaggtgacagcaagggaagcccc
cagggaggccggaggtacggtgtgcaagtgatgggcagtggacttctcgcagaaatgaaa
gccaagcaggagaagagagcagcctctgctcaaaagaaacttgggaatgacacaactccc
agagagtcttttgacacgacaatgagctcagaacgactggatggaagtggtacagtgcct
aaacaacagcagacccttccagagagtcggtttgcattgaataaaggcgattccatctca
gcatcatcagaaaaaaattcaaaagctgaaccaaaggcagaagctggtgcaaaggcaaga
agttcttccaatacaccaactagtccaaagcccccactgcagtcaacaaagcccagcctg
gcaggacgacccacagtgccacagaaaccacgctctgcctctcgtactgaggatgctccg
gagtctccttccggccccagttccccaaaagttgccctgctcccaccagtgctgaagaaa
gttccttctgataaagaaaaggatggtcagagcagcccctcagtcagatcattttctcaa
gaagaacaaacaggagattgtcaaaaaagagatgcagctcttgactgtgccaagccatct
ggcagcgtgaaaaccactccggggcagtattctaccagtgcagaagaggaagctaatgtg
cttgggcagaggatggcacaggcaacttctgctgcgaaaagaagccctgggcagcaggct
catgagttccaggaactgaagcagaggtccttaagtaaagacggccatcagggaagcaag
tccagtgactctggtgaagaagcagataaagattttatttttatttag
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integrated database retrieval system
