Taeniopygia guttata (zebra finch): 100227407
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Entry
100227407 CDS
T01082
Symbol
HOMER2
Name
(RefSeq) homer protein homolog 2 isoform X1
KO
K15010
homer
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100227407 (HOMER2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tgu03037
]
100227407 (HOMER2)
Cilium and associated proteins [BR:
tgu03037
]
Other cilia and associated proteins
Stereociliary proteins
100227407 (HOMER2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
T4SS_LegC2C7
FKBP15
NOCA1_mid
CCDC39
MAD
DMPK_coil
GAS
EVH1_PP4R3
ODF2_C
Rod_CreS
TMF_DNA_bd
CCPG1_N
TolA_bind_tri
Uso1_p115_C
SPC25_N
Rab11-FIP3
UPF0242
PH_PHS1
ERM_helical
CEP131_C
ANG-1
ZapB_rel
LEKR1
CEP89
PMD1-like
DUF5790
DUF3450
Arc_MA
ATG16
UNC83_four_bundle
Motif
Other DBs
NCBI-GeneID:
100227407
NCBI-ProteinID:
XP_030136946
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All DBs
Position
10:complement(10751722..10811074)
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AA seq
407 aa
AA seq
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MCEVGTRPPLAAERGEPPGGAAAAERCRDMGEQPIFTTRAHVFQIDPSTKKNWVPASKQA
VTVSYFYDSTRNSYRIISVDGAKVIINSTITPNMTFTKTSQKFGQWADSRANTVFGLGFP
SEQQLTKFAEKFQEVKEAAKLARDRSQEKIETSSNHSQTSFAAKMKREMQETPSVRLCVV
LQESGRETPSSTRASSVNGTDDEKASHGGPAEAHLKSENDKLKIALAQSSSNVKKWETEL
QSLRESNARLSTALQESAASIEHWKKQFSACKEENDQLRGKIEELEEQCNEINKEKERNA
QLSRRLQELETELQDKELELEELRKQGEIIPELMSECESVSEQLQAAEKKNKDLEEKVRT
LRTEVEENKHRQTNLKTELKNFLDVLDGKIDELHDFRQGLSKLGVDN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaagtggggacgcggccgccgctggccgccgagcgcggggagccgcccgggggt
gccgccgccgccgagaggtgccgagacatgggagaacagcccatcttcaccaccagagcc
catgtcttccaaattgaccccagcacgaagaagaactgggttcctgcaagcaagcaggct
gtaactgtttcctacttctatgacagcaccagaaacagctatcggattatcagtgtggat
ggagccaaggtgatcataaacagcaccatcacccccaacatgaccttcactaaaacgtcg
cagaagttcgggcagtgggcagacagcagagccaacaccgtcttcgggctgggcttcccc
tccgagcagcagctgacaaagtttgcagagaagttccaagaagtaaaagaagctgccaaa
cttgcaagagacagatctcaagagaaaattgaaacctcaagcaatcattcacagaccagc
tttgcagccaagatgaaaagggagatgcaggagacacccagtgttcgtttgtgtgttgtg
ctgcaggagtctggacgtgaaacaccatcttccactcgagcttcaagtgtgaatggcaca
gacgacgagaaggcatcacatggtggccctgctgaggcacatctcaaatctgagaatgat
aaattaaaaattgctctagcccaaagttcatccaacgtgaagaagtgggagacggagctg
cagtcgctgcgggagagcaacgcgcggctgtccacggccctgcaggagtcggcggccagc
atcgagcactggaagaagcagttctcagcctgcaaggaggagaacgaccagctgaggggc
aagattgaagaactggaggaacagtgcaatgaaataaataaagagaaggaaagaaatgca
cagttgagtagacgtcttcaggaactggaaacagaacttcaggacaaagagctggaactg
gaagagctccgaaagcagggtgaaattataccagaactaatgtcagaatgtgaatctgta
tctgaacaattacaggctgctgagaaaaagaacaaagatcttgaagagaaagtcagaacg
ctaaggacagaagttgaagagaacaaacataggcagaccaaccttaaaactgaattaaag
aattttttagatgtactagacgggaagatagatgaattacatgacttccgacaaggactg
tctaaacttggggttgacaattag
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