Taeniopygia guttata (zebra finch): 100227585
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Entry
100227585 CDS
T01082
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform X3
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100227585 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tgu01007
]
100227585 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100227585 (KARS1)
Enzymes [BR:
tgu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
100227585 (KARS1)
Amino acid related enzymes [BR:
tgu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100227585 (KARS1)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100227585 (KARS1)
Prokaryotic type
Other AARSs
100227585 (KARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
100227585
NCBI-ProteinID:
XP_002197190
Ensembl:
ENSTGUG00000008400
UniProt:
H0ZDN2
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All DBs
Position
11:20983259..20992110
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AA seq
586 aa
AA seq
DB search
MMAAAAARECNAEDIESHLSKNELKRRLKAERKTAEKEAKQKEQSEKHANKPSLTSEDNV
GTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNI
TVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYFRVNSKLRRGDIIGV
EGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKF
ITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYH
KMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKH
ITGSYKITYHPDGQDGQTYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFATEETRRFFD
NLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTE
RFELFVMKKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPT
AGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDSRKEAQPAEGTSV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggcggcggcgcgcgagtgcaacgcggaggatattgagtcgcacctcagc
aaaaatgagctgaagagacgtttaaaagctgagagaaaaacagctgaaaaagaagcaaag
cagaaggagcaaagtgaaaagcatgcaaataagccttccctgacttctgaggataatgtt
ggtactgatgaggagagcttggacccaaatcaatactacaagattcgtagccatgcagtc
caacagcttaagggctccagtgaagatccctatccccacaagttccacgttgacttatcg
ctctcagattttatagacaagtacagtcacctgcagccaggagatcaccttacaaacatt
accgtgagagtggcaggtcgaatccatgcgaagcgtgctgctggagggaaactgattttc
tatgatcttcgtggtgaaggagtcaagctgcaggtcatggcaaattccagcctctacaaa
tctgaggaagaatatttccgtgttaacagcaagctgcgtcgtggggacattattggtgta
gaggggaatcctgggaaaacaaggaaaggggaattgagtattattccttatgaaatcact
ctcttgtctccgtgcctgcacatgctgcctcatcttcattttggcctcaaagataaggaa
accaggtatcgtcagagatatttggatttaattcttaatgattatgtgaggcagaaattt
ataacccgtgcaaagatcatcacttaccttcgtagctttctagatgagttgggctttctt
gaggttgaaactcctatgatgaatgtaattccaggtggagctgtggcaaagccatttatc
acataccacaatgaactggatatgaatttatatatgagaattgctccagaactttaccat
aagatgttggtggttggtggcctggacagagtatatgaaattgggcgtcagttccggaat
gaaggaattgatttgactcacaaccctgagttcacaacttgtgaattttatatggcttat
gcggactaccatgatttaatggaaattacagagaagttgctttcagggatggtgaaacat
attacgggaagttacaagatcacttaccatccagatggtcaagatggacagacctatgag
atagattttactcctcccttccggcgaattagcatggtgtatgatctggaaaaggtcctg
ggagtgaagtttccatcaactgagtgttttgcaactgaagaaactcgcaggttctttgat
aacctttgtgtggagagaaatgttgaatgtccacctcccaggacaacagctaggcttctt
gacaaattagttggtgaattcctggaagtcacctgtatcaaccctacattcatctgtgat
cacccacaggtcatgagtccacttgccaaatggcatcgctctcttccgggactaacagaa
cgctttgaactctttgtaatgaagaaggaagtgtgcaatgcctacacagaacttaatgat
cctttccgacagcgtcagctttttgaggatcaggccaaggcaaaagctgcaggtgatgat
gaagccatgtttattgatgaaaacttctgcactgcactggagtacggtcttcctcctaca
gctggctggggcatgggaattgatcgcttgactatgttccttacagattccaataacatc
aaggaggtgctgctcttccccgccatgaaaccggaggacagcaggaaggaggcgcagccc
gccgagggcacctctgtgtga
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